parveendabas / GBMatlasLinks
☆18Updated 3 years ago
Alternatives and similar repositories for GBMatlas
Users that are interested in GBMatlas are comparing it to the libraries listed below
Sorting:
- Ordering gene-expression and functional events in single-cell experiments☆27Updated last year
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 2 years ago
- ☆17Updated 2 years ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆24Updated 8 months ago
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 4 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 3 months ago
- ☆15Updated 3 years ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆17Updated 2 years ago
- ☆21Updated 5 months ago
- Landscape Single Cell Entropy☆21Updated 5 years ago
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Updated 2 years ago
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆17Updated 3 years ago
- ☆62Updated last year
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 4 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 3 years ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆20Updated last year
- https://molecular-neurogenetics.github.io/truster/☆11Updated 5 months ago
- ☆18Updated last year
- Computational pipeline to process EasySci-RNA data.☆22Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- Scripts from the GBM cellular states paper☆20Updated 4 years ago
- ☆16Updated 4 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆25Updated 3 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 8 months ago
- A record of the analysis pipelines used to create the HTAPP data☆34Updated 8 months ago