VirusScan Pipeline
☆12Feb 7, 2026Updated 4 months ago
Alternatives and similar repositories for VirusScan
Users that are interested in VirusScan are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Detect somatic variants from tumor and normal WGS/WXS data☆20Apr 24, 2026Updated 2 months ago
- Benchmarking computational doublet-detection methods for single-cell RNA sequencing data☆10Feb 25, 2021Updated 5 years ago
- ☆20Feb 24, 2017Updated 9 years ago
- 3D hotspot mutation proximity analysis tool☆53Mar 31, 2023Updated 3 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆38Apr 5, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Vaeda method for computational doublet annotation☆20Feb 1, 2026Updated 4 months ago
- A modular tool for proportion analysis in single-cell sequencing data☆26Feb 26, 2026Updated 4 months ago
- ☆14Jan 24, 2024Updated 2 years ago
- scripts used for processing and analyzing data in the article.☆13Oct 31, 2019Updated 6 years ago
- ☆10Nov 10, 2023Updated 2 years ago
- Human Endometrial Cell Atlas (HECA). An integrated single-cell reference atlas of the human endometrium.☆32Jun 19, 2024Updated 2 years ago
- ☆11Sep 17, 2020Updated 5 years ago
- ☆11Feb 1, 2023Updated 3 years ago
- Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"☆13Jan 24, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ViBE: a hierarchical BERT model to identify viruses using metagenome sequencing data☆11Sep 6, 2022Updated 3 years ago
- ☆12Apr 10, 2021Updated 5 years ago
- funny geom/stat functions for visualization☆11Aug 30, 2023Updated 2 years ago
- Transfer polygon(float vertex) to a mask which demonstrate the inner points of polygon, implement by Python☆10Oct 19, 2019Updated 6 years ago
- Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models☆23Oct 22, 2018Updated 7 years ago
- A Foundation Language Model For Multilayer Regulation of RNA☆22Nov 30, 2025Updated 6 months ago
- ☆14Jul 5, 2022Updated 3 years ago
- identifying mutational significance in cancer genomes☆62Nov 16, 2022Updated 3 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Sep 8, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Learning Protein-Ligand Properties with Atomic Environment Vectors☆10Apr 19, 2024Updated 2 years ago
- ☆34Feb 25, 2025Updated last year
- simple tutorial on evolutionary game theory☆18Nov 22, 2023Updated 2 years ago
- A comprehensive pipeline to analyze and visualize structural variants☆20Jan 28, 2020Updated 6 years ago
- Contains tools used by cBioPortal data curators when preparing data for upload into the datahub repos.☆22Jun 1, 2026Updated 3 weeks ago
- Peptide Virtual Screening Pipeline☆14Jul 3, 2019Updated 6 years ago
- ☆14Jul 27, 2019Updated 6 years ago
- Characterization of Germline variants☆101Mar 15, 2022Updated 4 years ago
- Meta-analysis of drug target evidence in single-cell data☆17Oct 22, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆17Mar 11, 2023Updated 3 years ago
- biostat final exam data and code☆10Jun 12, 2020Updated 6 years ago
- ☆23May 28, 2026Updated last month
- RNA-Seq pipeline☆36Jul 22, 2015Updated 10 years ago
- ☆14Jul 6, 2023Updated 2 years ago
- Ordering gene-expression and functional events in single-cell experiments☆33May 31, 2026Updated 3 weeks ago
- A pipeline for comprehensive genomic analyses of Mycobacterium tuberculosis with a focus on clinical decision making as well as research☆19Updated this week