kerseviciute / aPEARLinks
Enrichment Networks for Pathway Enrichment Analysis
☆56Updated 2 years ago
Alternatives and similar repositories for aPEAR
Users that are interested in aPEAR are comparing it to the libraries listed below
Sorting:
- ☆70Updated 3 years ago
- A R package for advanced single cell data viz☆68Updated this week
- R Package for Single-Cell Dataset Processing and Visualization☆64Updated 4 years ago
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆79Updated last year
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 4 months ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆46Updated last year
- Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment☆28Updated 2 years ago
- ☆114Updated 5 months ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆42Updated last year
- scGSVA: Perform GSVA for single cell RNA seq☆64Updated 9 months ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- ☆69Updated last year
- ☆71Updated 2 years ago
- ☆86Updated last year
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆111Updated 5 months ago
- scWGCNA☆61Updated 2 years ago
- ☆62Updated 6 years ago
- Multiscale embedded gene co-expression network analysis☆54Updated last year
- ☆37Updated 5 years ago
- Bayesian network plot for the enrichment analysis results☆65Updated 11 months ago
- Create stacked violin plot☆49Updated 3 years ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆92Updated 8 months ago
- Repository for codes for the HBCA paper☆37Updated 2 years ago
- Single cell RNA-seq analysis bundle☆35Updated 5 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆87Updated last month
- marker-based purification of cell types from single-cell RNA-seq datasets☆121Updated last month
- Various utility functions for Seurat single-cell analysis☆53Updated last week
- An R toolkit for estimation of cell composition from bulk expression data☆77Updated 2 months ago
- an integrative analysis tool for analysing large-scale single cell RNA-sequencing data☆35Updated 2 years ago