kerseviciute / aPEARLinks
Enrichment Networks for Pathway Enrichment Analysis
☆60Updated 2 years ago
Alternatives and similar repositories for aPEAR
Users that are interested in aPEAR are comparing it to the libraries listed below
Sorting:
- A R package for advanced single cell data viz☆68Updated last month
- R Package for Single-Cell Dataset Processing and Visualization☆64Updated 4 years ago
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆81Updated last year
- ☆71Updated 3 years ago
- Create stacked violin plot☆51Updated 3 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- scGSVA: Perform GSVA for single cell RNA seq☆65Updated 11 months ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 4 years ago
- ☆115Updated last month
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆43Updated last year
- ☆73Updated 2 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 6 months ago
- Code repository for single cell RNA-seq☆37Updated 5 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆38Updated last year
- Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment☆28Updated 2 years ago
- ☆75Updated last year
- Visualizing SingleCell data Using GGplot2☆35Updated last year
- Hypoxia associated molecular feature analysis☆35Updated 5 years ago
- ☆62Updated 6 years ago
- ☆87Updated last month
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 3 months ago
- scWGCNA☆61Updated 2 years ago
- Generate masks for scRNA-seq clusters on t-SNE or UMAP plots☆31Updated 5 months ago
- ☆32Updated 3 years ago
- Bayesian network plot for the enrichment analysis results☆65Updated last year
- R package for robust clustering of single cell RNA sequencing data☆35Updated last year
- Methods for decontamination of single cell data☆48Updated 8 months ago
- ☆42Updated last year
- A pipeline for scRNA-seq data analysis☆15Updated 6 months ago
- Various utility functions for Seurat single-cell analysis☆53Updated this week