hbliu / Open4GeneLinks
Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis
☆16Updated 2 months ago
Alternatives and similar repositories for Open4Gene
Users that are interested in Open4Gene are comparing it to the libraries listed below
Sorting:
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆25Updated last month
- ☆16Updated 3 months ago
- GWAS genetics Fine-mapping method☆26Updated last year
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆26Updated 3 years ago
- a deep generative model for single-cell survival analysis☆15Updated 2 months ago
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆16Updated 4 months ago
- Functional Annotation for Single-Cell Transcriptomics☆11Updated last year
- Tissue-Gene Fine-Mapping☆26Updated 10 months ago
- ☆11Updated 9 months ago
- Create Regional Association Plots☆13Updated 5 months ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Updated 3 years ago
- xQTLbiolinks: an R package for integrative analysis with xQTL data☆17Updated last week
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Updated 5 years ago
- ☆19Updated 2 years ago
- ☆14Updated last year
- ☆33Updated 9 months ago
- ☆18Updated 4 years ago
- 🌓 Allele specific analyses across cell states and conditions☆10Updated 3 years ago
- simpler single cell RNAseq data Visualization☆10Updated 11 months ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 7 months ago
- python API to the CoGAPS NMF package☆19Updated 8 months ago
- Workflow for performing cistrome-wide associations studies☆11Updated 3 years ago
- Kidney Epigenome and Transcriptome-based multi-stage Prioritization☆17Updated 3 years ago
- identifying disease critical cell types and programs from single cell RNAseq☆58Updated 3 years ago
- ☆12Updated 4 years ago
- Multi-Omic Strategies for TWAS☆13Updated 2 years ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Updated 2 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆59Updated 3 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- Waelchli-lab / Single-cell-atlas-of-the-human-brain-vasculature-accross-development-adulthood-and-diseaseMolecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level☆14Updated last year