☆22Oct 30, 2022Updated 3 years ago
Alternatives and similar repositories for DeepSpaCE
Users that are interested in DeepSpaCE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PyTorch implementation of HisToGene☆58Nov 30, 2021Updated 4 years ago
- Localization of transcribed enhancers and quntification of their usage from the initiation sites of bidirectionally transcribed loci☆15Dec 19, 2024Updated last year
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆69Mar 18, 2024Updated 2 years ago
- Cell type purification by single-cell transcriptome-trained sorting☆16Jul 8, 2019Updated 7 years ago
- ☆60Jan 2, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆26Jul 12, 2023Updated 3 years ago
- ☆14Feb 21, 2023Updated 3 years ago
- Scaling up spatial transcriptomics for large-sized tissues: uncovering cellular-level tissue architecture beyond conventional platforms☆51Oct 22, 2025Updated 11 months ago
- Her2 Breast Cancer Project☆110Nov 27, 2022Updated 3 years ago
- ☆105May 4, 2026Updated 5 months ago
- Code for spatial subclone paper☆19Jan 23, 2025Updated last year
- ☆21Jun 29, 2022Updated 4 years ago
- A package for analyzing spatial transcriptomics data with Gaussian smoothing, spatial gene correlation network clustering, gene module vi…☆25Apr 3, 2026Updated 6 months ago
- Scripts used for the ACT paper☆12May 6, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆33Apr 29, 2026Updated 5 months ago
- <Bioinformatics> scCancer2: data-driven in-depth annotations of the tumor microenvironment at single-level resolution☆26Aug 27, 2025Updated last year
- R package of CSOmap(developing☆13Mar 22, 2022Updated 4 years ago
- ☆57Mar 28, 2025Updated last year
- Cluster Identity Predictor (R package implementation)☆22Aug 13, 2026Updated last month
- Code for the THItoGene☆31Apr 9, 2025Updated last year
- ☆15Oct 4, 2021Updated 5 years ago
- Modelling RBP binding preferences to predict RPB binding sites☆11Mar 4, 2021Updated 5 years ago
- SCDC☆52Jun 20, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆27May 12, 2020Updated 6 years ago
- Sequences from Adaptyv Bio’s EGFR Protein Design Competition☆16Aug 28, 2025Updated last year
- Cell level integrated analysis of tissue histology and spatial transcriptomics☆32Oct 6, 2025Updated last year
- ☆13Sep 30, 2024Updated 2 years ago
- ☆14May 28, 2025Updated last year
- [Briefings in Bioinformatics 2025] A GCN and pathology image large model-based method to predict single-cell resolution spatial gene expr…☆27Dec 1, 2025Updated 10 months ago
- Reference-free cell-type deconvolution of multi-cellular spatially resolved transcriptomics data☆159Aug 3, 2025Updated last year
- ☆63Apr 26, 2022Updated 4 years ago
- ☆175Dec 20, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Deep learning on histopathology images.☆149Sep 8, 2021Updated 5 years ago
- ☆10Jun 30, 2026Updated 3 months ago
- Identify one or more connected, focally amplified genomic regions to elucidate the architecture of focal amplifications such as ecDNA.☆13Sep 22, 2026Updated 2 weeks ago
- ☆18Jun 13, 2019Updated 7 years ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆12Mar 11, 2020Updated 6 years ago
- Evaluation code for the PanNuke dataset☆31Oct 20, 2020Updated 5 years ago
- scOpen: single-cell open chromatin analysis via NMF modelling☆28Feb 4, 2023Updated 3 years ago