UCLouvain-CBIO / scp
Single cell proteomics data processing
☆25Updated 3 months ago
Alternatives and similar repositories for scp:
Users that are interested in scp are comparing it to the libraries listed below
- A tool for large scale omics datasets evaluation☆24Updated last year
- Integration ribosome profiling - mass spectrometry☆14Updated last month
- R package for analysing proteomics data☆49Updated last year
- ☆18Updated last year
- Explore the cancer relevance of your gene list☆49Updated 4 months ago
- R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.☆13Updated this week
- ☆17Updated last month
- An S3 data object and framework for common quantitative proteomic analyses☆39Updated this week
- DEqMS is a tool for quantitative proteomic analysis☆22Updated last month
- ☆13Updated last year
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆33Updated this week
- Quantitative features for mass spectrometry data☆26Updated this week
- SCASA: Single cell transcript quantification tool☆20Updated last year
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆59Updated 6 months ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Updated 6 years ago
- Shiny app for making and annotating Volcano plots☆22Updated 5 months ago
- Access and Format Single-cell RNA-seq Datasets from Public Resources☆35Updated last month
- R-Shiny GUI integrated with the MSstats package family☆15Updated last week
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆15Updated 3 years ago
- Using BCR and expression for sequence embedding☆19Updated last month
- single cell Gene co-Expression Network Analysis☆9Updated 2 years ago
- Junction centric alternative splicing translator☆19Updated 2 years ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆22Updated 2 months ago
- Proteomics Toolset for Integrative Data Analysis☆22Updated last year
- Summary statistics for repertoires☆16Updated last year
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆25Updated last year
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 4 years ago
- Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering☆12Updated 5 years ago
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Updated last month
- Full annotation using shape-constrained trees☆25Updated last year