JinmiaoChenLab / SEDRLinks
☆66Updated last year
Alternatives and similar repositories for SEDR
Users that are interested in SEDR are comparing it to the libraries listed below
Sorting:
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆79Updated 3 years ago
- ☆145Updated last year
- ☆41Updated 2 years ago
- Identify spatial domain☆88Updated 8 months ago
- ☆60Updated last year
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆50Updated last year
- Spatial-Linked Alignment Tool☆90Updated last year
- overview of spatial datasets☆76Updated last year
- Cell clustering for spatial transcriptomics data with graph neural network☆64Updated 2 years ago
- ☆42Updated last year
- ☆129Updated 3 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆49Updated 2 years ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆77Updated last year
- an SRT simulator for simulating multiple spatial variability in spatial resolved transcriptomics and generating unbiased simulated SRT da…☆26Updated 10 months ago
- Super-resolved spatial transcriptomics by deep data fusion☆73Updated 2 years ago
- domain adaptation of spatial and single-cell transcriptome☆28Updated last year
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆77Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆62Updated 2 years ago
- ☆158Updated last year
- conST: an interpretable multi-modal contrastive learning framework for spatial transcriptomics☆29Updated last year
- ☆15Updated 2 years ago
- Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project☆91Updated last year
- SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…☆255Updated 2 years ago
- STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages☆25Updated 2 years ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆99Updated 11 months ago
- End-to-end analysis of spatial multi-omics data☆102Updated this week
- An offical repo for paper "Single-cells are Spatial Tokens: Transformers for Spatially Resolved Transcriptomics Data Imputation"☆18Updated 2 years ago
- ☆32Updated 2 years ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆41Updated last year
- ☆128Updated last year