JinmiaoChenLab / SEDR_analysesLinks
☆41Updated 2 years ago
Alternatives and similar repositories for SEDR_analyses
Users that are interested in SEDR_analyses are comparing it to the libraries listed below
Sorting:
- ☆66Updated last year
- Identify spatial domain☆87Updated 7 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆79Updated 3 years ago
- ☆145Updated last year
- ☆42Updated last year
- conST: an interpretable multi-modal contrastive learning framework for spatial transcriptomics☆29Updated last year
- SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…☆254Updated 2 years ago
- ☆13Updated last year
- Cell clustering for spatial transcriptomics data with graph neural network☆64Updated 2 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆62Updated 2 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆49Updated 2 years ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆76Updated last year
- ☆60Updated last year
- An offical repo for paper "Single-cells are Spatial Tokens: Transformers for Spatially Resolved Transcriptomics Data Imputation"☆18Updated 2 years ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆50Updated last year
- Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project☆91Updated last year
- Her2 Breast Cancer Project☆92Updated 3 years ago
- overview of spatial datasets☆76Updated last year
- ☆157Updated last year
- ☆128Updated 3 years ago
- STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages☆25Updated 2 years ago
- Spatial-Linked Alignment Tool☆90Updated last year
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆76Updated last year
- Super-resolved spatial transcriptomics by deep data fusion☆73Updated 2 years ago
- ☆11Updated last year
- an SRT simulator for simulating multiple spatial variability in spatial resolved transcriptomics and generating unbiased simulated SRT da…☆25Updated 10 months ago
- A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.☆25Updated last year
- a unified single-cell data integration framework by optimal transport☆34Updated last year
- Sub-cellular spatial transcriptomics Cell Segmentation☆68Updated 2 years ago
- Multi-omics data analysis for rare population inference using single-cell graph transformer☆22Updated 2 months ago