deng-ai-lab / soScope
☆17Updated 3 months ago
Alternatives and similar repositories for soScope:
Users that are interested in soScope are comparing it to the libraries listed below
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆34Updated 8 months ago
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆53Updated last year
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆27Updated last year
- Sub-cellular spatial transcriptomics Cell Segmentation☆62Updated last year
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆52Updated 9 months ago
- ☆46Updated 2 weeks ago
- ☆32Updated last year
- domain adaptation of spatial and single-cell transcriptome☆26Updated 6 months ago
- ☆55Updated 8 months ago
- Her2 Breast Cancer Project☆67Updated 2 years ago
- ☆38Updated 2 years ago
- MUSE is a deep learning approach characterizing tissue composition through combined analysis of morphologies and transcriptional states f…☆34Updated 2 years ago
- ☆12Updated 6 months ago
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆23Updated 2 weeks ago
- Super-resolved spatial transcriptomics by deep data fusion☆72Updated 2 years ago
- Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices☆60Updated last year
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆35Updated 11 months ago
- ☆54Updated 4 months ago
- an SRT simulator for simulating multiple spatial variability in spatial resolved transcriptomics and generating unbiased simulated SRT da…☆23Updated 2 weeks ago
- ☆23Updated this week
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆63Updated 10 months ago
- PyTorch implementation of HisToGene☆36Updated 3 years ago
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆17Updated last week
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆14Updated last week
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆23Updated 6 months ago
- ☆14Updated last month
- Spatial direct messaging detected by bivariate Moran☆25Updated 2 months ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆22Updated 5 months ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆34Updated 3 weeks ago
- ☆25Updated last year