☆25Apr 3, 2025Updated last year
Alternatives and similar repositories for soScope
Users that are interested in soScope are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆27Apr 29, 2026Updated 2 months ago
- Super-resolved spatial transcriptomics by deep data fusion☆74Mar 30, 2023Updated 3 years ago
- ☆167Dec 20, 2024Updated last year
- ☆13Sep 30, 2024Updated last year
- Code for the paper `Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics"☆13Apr 23, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆57Mar 28, 2025Updated last year
- Code for "Whole brain alignment of spatial transcriptomics between humans and mice with BrainAlign"☆17Oct 4, 2024Updated last year
- SpaDiT: Diffusion Transformer for Spatial Gene Expression Prediction using scRNA-seq☆25Jun 2, 2026Updated last month
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆14Oct 17, 2024Updated last year
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆66Mar 18, 2024Updated 2 years ago
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆54Aug 11, 2025Updated 10 months ago
- Superpixel for CIFAR dataset☆11Sep 9, 2022Updated 3 years ago
- ☆138Feb 13, 2025Updated last year
- ☆18Nov 24, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Flow2Spatial reconstructs spatial proteomics through transfer learning.☆25May 16, 2025Updated last year
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆116Oct 15, 2024Updated last year
- Morphology-Enhanced Spatial Transcriptome Analysis Integrator☆27Mar 16, 2025Updated last year
- Spatial-Linked Alignment Tool☆93Dec 20, 2024Updated last year
- rMSI processing methods using C++☆11Dec 3, 2021Updated 4 years ago
- ☆10Apr 22, 2024Updated 2 years ago
- Code for the spatial transcriptomic paper on IPF lungs☆23Jul 18, 2024Updated last year
- ☆70Nov 6, 2024Updated last year
- Configs and descriptions of circos plots created on FUMA web application☆15Dec 10, 2017Updated 8 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆13May 28, 2025Updated last year
- ☆46May 31, 2024Updated 2 years ago
- R toolkit for inference and analysis of pathway-mediated cell-cell communication chain from single-cell transcriptomics☆37Mar 10, 2025Updated last year
- Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices☆71Nov 20, 2023Updated 2 years ago
- ☆25Jun 6, 2025Updated last year
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆22Mar 18, 2025Updated last year
- Pytorch version of Continuous Language Generative Flow (ACL 2021)☆11Sep 14, 2021Updated 4 years ago
- GASTON: deep learning algorithm learns "topography" of a tissue slice from spatial transcriptomics data☆72Dec 1, 2025Updated 7 months ago
- ☆12Mar 21, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆63Jul 23, 2024Updated last year
- ☆27Oct 25, 2023Updated 2 years ago
- scITDG is a tool for identifying time-dependent genes in single-cell sequencing data☆16Nov 24, 2025Updated 7 months ago
- A novel spatial multi-modal omics framework, named PRototype-Aware Graph Adaptative aggregation (PRAGA) for spatial multi-modal omics ana…☆20May 29, 2025Updated last year
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆34Jun 21, 2026Updated last week
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆11Jun 23, 2026Updated last week
- Flexibility-conditioned protein structure design☆36Mar 10, 2026Updated 3 months ago