deng-ai-lab / soScopeLinks
☆23Updated 10 months ago
Alternatives and similar repositories for soScope
Users that are interested in soScope are comparing it to the libraries listed below
Sorting:
- Sub-cellular spatial transcriptomics Cell Segmentation☆68Updated 2 years ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆77Updated last year
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆77Updated last year
- ☆114Updated this week
- Super-resolved spatial transcriptomics by deep data fusion☆73Updated 2 years ago
- ☆158Updated last year
- domain adaptation of spatial and single-cell transcriptome☆28Updated last year
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆64Updated last year
- ☆60Updated last year
- ☆66Updated last year
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆50Updated last year
- ☆15Updated 2 years ago
- A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.☆25Updated last year
- Graph-based foundation model for spatial transcriptomics data. Zero-shot spatial domain inference, batch-effect correction, and many othe…☆116Updated 2 weeks ago
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆149Updated 2 months ago
- Identify spatial domain☆88Updated 8 months ago
- ☆52Updated 3 months ago
- ☆43Updated 8 months ago
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆128Updated 8 months ago
- ☆43Updated last year
- an SRT simulator for simulating multiple spatial variability in spatial resolved transcriptomics and generating unbiased simulated SRT da…☆26Updated 10 months ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆41Updated last year
- ☆126Updated 11 months ago
- Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices☆69Updated 2 years ago
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆16Updated this week
- ☆33Updated last year
- ☆19Updated 2 weeks ago
- MUSE is a deep learning approach characterizing tissue composition through combined analysis of morphologies and transcriptional states f…☆37Updated 3 years ago
- ☆129Updated 3 years ago
- ☆15Updated 7 months ago