deng-ai-lab / soScopeLinks
☆23Updated 7 months ago
Alternatives and similar repositories for soScope
Users that are interested in soScope are comparing it to the libraries listed below
Sorting:
- ☆147Updated 10 months ago
- ☆63Updated last year
- Sub-cellular spatial transcriptomics Cell Segmentation☆68Updated 2 years ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆71Updated last year
- domain adaptation of spatial and single-cell transcriptome☆28Updated last year
- Super-resolved spatial transcriptomics by deep data fusion☆74Updated 2 years ago
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆62Updated last year
- ☆60Updated last year
- Identify spatial domain☆86Updated 5 months ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆47Updated last year
- an SRT simulator for simulating multiple spatial variability in spatial resolved transcriptomics and generating unbiased simulated SRT da…☆25Updated 8 months ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆73Updated last year
- ☆31Updated 9 months ago
- ☆42Updated last year
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆123Updated 5 months ago
- Her2 Breast Cancer Project☆87Updated 2 years ago
- ☆15Updated 2 years ago
- Construction of a 3D whole organism spatial atlas by joint modeling of multiple slices☆69Updated last year
- ☆125Updated 3 years ago
- ☆15Updated 4 months ago
- ☆138Updated last year
- Spatial-Linked Alignment Tool☆89Updated 10 months ago
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆115Updated 7 months ago
- ☆39Updated 5 months ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆33Updated 7 months ago
- A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.☆22Updated last year
- ☆33Updated 10 months ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆26Updated last year
- SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…☆243Updated 2 years ago
- ☆113Updated 9 months ago