guott15 / SPIRALLinks
☆16Updated 8 months ago
Alternatives and similar repositories for SPIRAL
Users that are interested in SPIRAL are comparing it to the libraries listed below
Sorting:
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆37Updated last year
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 8 months ago
- ☆31Updated 7 months ago
- Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information☆21Updated 3 years ago
- Detect hierarchical structures in cell-cell communications☆15Updated 8 months ago
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆13Updated last week
- ☆50Updated last week
- Bayesian Analytics for Spatial Segmentation☆30Updated 5 months ago
- UniCell Deconvolve Paper☆10Updated 2 years ago
- CAST package☆40Updated 11 months ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆32Updated 6 months ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆39Updated 8 months ago
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆22Updated 2 years ago
- ☆31Updated 3 months ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆39Updated 7 months ago
- ☆64Updated 2 months ago
- Code used to benchmark Xenium☆69Updated last year
- ☆60Updated last year
- ☆37Updated 2 months ago
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆26Updated 11 months ago
- scTM: A package for topic modelling in transcriptomics data☆22Updated last year
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆61Updated last year
- End-to-end analysis of spatial multi-omics data☆93Updated 2 months ago
- ☆18Updated 3 months ago
- ☆11Updated last year
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆72Updated 9 months ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆25Updated 11 months ago
- Publically accessible code for DIISCO method☆12Updated this week
- Spatial direct messaging detected by bivariate Moran☆30Updated 3 months ago
- ☆30Updated 2 years ago