uhlerlab / STACILinks
☆15Updated 2 years ago
Alternatives and similar repositories for STACI
Users that are interested in STACI are comparing it to the libraries listed below
Sorting:
- ☆60Updated last year
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆50Updated last year
- ☆64Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆78Updated 3 years ago
- ☆40Updated 3 years ago
- ☆18Updated 9 months ago
- an SRT simulator for simulating multiple spatial variability in spatial resolved transcriptomics and generating unbiased simulated SRT da…☆25Updated 9 months ago
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆11Updated 3 months ago
- ☆15Updated 5 months ago
- ☆143Updated last year
- ☆52Updated 2 months ago
- domain adaptation of spatial and single-cell transcriptome☆28Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆49Updated 2 years ago
- Spatial-Linked Alignment Tool☆90Updated last year
- Reproducing the experiments of the DestVI paper☆22Updated 3 years ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆74Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆40Updated last year
- data for spacejam2☆18Updated 3 years ago
- ☆127Updated last year
- Spatial Transcriptomic Analysis using Reference-Free auxiliarY deep generative modeling and Shared Histology☆128Updated 6 months ago
- ☆127Updated 3 years ago
- Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project☆90Updated last year
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆26Updated last year
- End-to-end analysis of spatial multi-omics data☆101Updated last month
- The benchmarking of spatial transcriptomics deconvolution methods☆33Updated 2 years ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆27Updated last year
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆13Updated last year
- Deciphering tumor ecosystems at super-resolution from spatial transcriptomics with TESLA☆63Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆61Updated 2 years ago
- ☆61Updated 2 years ago