RucDongLab / STAGATE_pyGLinks
Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framework)
☆62Updated 2 years ago
Alternatives and similar repositories for STAGATE_pyG
Users that are interested in STAGATE_pyG are comparing it to the libraries listed below
Sorting:
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆79Updated 3 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆49Updated 2 years ago
- Cell clustering for spatial transcriptomics data with graph neural network☆64Updated 2 years ago
- ☆146Updated last year
- overview of spatial datasets☆76Updated last year
- Spatial-Linked Alignment Tool☆90Updated last year
- ☆129Updated 3 years ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆50Updated last year
- Single-cell biological network inference using a heterogeneous graph transformer☆76Updated 11 months ago
- ☆60Updated last year
- ☆66Updated last year
- Identify spatial domain☆88Updated 7 months ago
- ☆42Updated last year
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆77Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆41Updated last year
- STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages☆25Updated 2 years ago
- ☆32Updated 2 years ago
- End-to-end analysis of spatial multi-omics data☆102Updated this week
- Multi-omics data analysis for rare population inference using single-cell graph transformer☆22Updated 2 months ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆77Updated last year
- ☆35Updated 3 years ago
- ☆90Updated 2 years ago
- an SRT simulator for simulating multiple spatial variability in spatial resolved transcriptomics and generating unbiased simulated SRT da…☆25Updated 10 months ago
- ☆30Updated 2 years ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆98Updated 11 months ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆28Updated last year
- ☆21Updated last year
- ☆41Updated 2 years ago
- Spatial Transcriptomics human DLPFC pilot study part of the spatialLIBD project☆91Updated last year
- domain adaptation of spatial and single-cell transcriptome☆28Updated last year