☆31Aug 2, 2023Updated 2 years ago
Alternatives and similar repositories for SpaceFlow
Users that are interested in SpaceFlow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Feb 15, 2024Updated 2 years ago
- ☆41Dec 4, 2023Updated 2 years ago
- ☆10Nov 29, 2022Updated 3 years ago
- ☆156Mar 19, 2024Updated 2 years ago
- Cell clustering for spatial transcriptomics data with graph neural network☆66Mar 31, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- an SRT simulator for simulating multiple spatial variability in spatial resolved transcriptomics and generating unbiased simulated SRT da…☆29Mar 11, 2025Updated last year
- ☆15Aug 9, 2023Updated 2 years ago
- ☆23Dec 8, 2023Updated 2 years ago
- SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph con…☆261Feb 9, 2026Updated 3 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆84Mar 5, 2022Updated 4 years ago
- ☆18Jan 6, 2024Updated 2 years ago
- ☆68Nov 6, 2024Updated last year
- BANKSY: Spatial Clustering Algorithm that Unifies Cell-Typing and Tissue Domain Segmentation. Python package for spatial transcriptomics …☆80Nov 13, 2025Updated 6 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆51Apr 28, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆19May 5, 2024Updated 2 years ago
- Identify spatial domain☆92May 29, 2025Updated 11 months ago
- ☆11Sep 7, 2023Updated 2 years ago
- ☆17Mar 18, 2025Updated last year
- ☆22Jan 10, 2025Updated last year
- A package that performs cell type annotations on single cell resolution of spatial transcriptomics data, find the niche interactions and …☆16Dec 5, 2025Updated 5 months ago
- PRObabilistic Simulations of ScRNA-seq Tree-like Topologies☆25Jan 10, 2024Updated 2 years ago
- conST: an interpretable multi-modal contrastive learning framework for spatial transcriptomics☆29Feb 16, 2024Updated 2 years ago
- A novel machine learning pipeline to analyse spatial transcriptomics data☆247May 5, 2026Updated 2 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- PAST: a Prior-based self-Attention method for Spatial Transcriptomics☆12Mar 1, 2025Updated last year
- a simple R data package for curated cancer pathway-specific gene lists☆13Mar 31, 2020Updated 6 years ago
- Spatial Cellular Estimator for Tumors☆63May 5, 2026Updated 2 weeks ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆69Nov 10, 2023Updated 2 years ago
- Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.☆179Jan 8, 2026Updated 4 months ago
- ☆17Nov 13, 2021Updated 4 years ago
- Bayesian Analytics for Spatial Segmentation☆31May 4, 2025Updated last year
- ☆27Jun 4, 2023Updated 2 years ago
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆15Dec 15, 2025Updated 5 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Code for the paper `Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics"☆13Apr 23, 2024Updated 2 years ago
- ☆15Oct 24, 2025Updated 7 months ago
- Fast algorithms for GLM-PCA.☆16Mar 12, 2025Updated last year
- Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data☆18Apr 15, 2025Updated last year
- Testing a neutral evolution model on cancer sequencing data☆10Feb 17, 2021Updated 5 years ago
- The scripts used for the analyses in TOME project☆24Nov 28, 2025Updated 5 months ago
- Code, data and analysis for moslin.☆15Oct 7, 2024Updated last year