lizhen18THU / PAST
PAST: a Prior-based self-Attention method for Spatial Transcriptomics
☆12Updated last month
Alternatives and similar repositories for PAST:
Users that are interested in PAST are comparing it to the libraries listed below
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆34Updated 9 months ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- ☆11Updated 2 years ago
- ☆11Updated last year
- domain adaptation of spatial and single-cell transcriptome☆26Updated 7 months ago
- ☆21Updated 10 months ago
- Single Cell Multi-omics deep clustering☆27Updated last year
- Supervised cell type identification for scATAC-seq data☆13Updated last year
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆29Updated 4 years ago
- Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…☆20Updated 4 months ago
- ☆15Updated 2 years ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆27Updated 2 weeks ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆11Updated 4 months ago
- The benchmarking of spatial transcriptomics deconvolution methods☆30Updated 2 years ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆27Updated last year
- ☆38Updated 2 years ago
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆12Updated 6 months ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆39Updated last year
- ☆21Updated 8 months ago
- Reproducing result from the paper☆33Updated 3 years ago
- Spatiotemporal single-cell RNA sequencing of developing hearts reveals interplay between cellular differentiation and morphogenesis☆14Updated last year
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆38Updated 2 years ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆23Updated 6 months ago
- ☆17Updated 8 months ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆23Updated 7 months ago
- Computational pipeline to process EasySci-RNA data.☆18Updated last year
- SPROD: Spatial expression profiling de-noising☆36Updated last year
- Codes used in LISTA project.☆10Updated last year
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆35Updated 2 months ago