lizhen18THU / PASTLinks
PAST: a Prior-based self-Attention method for Spatial Transcriptomics
☆12Updated 8 months ago
Alternatives and similar repositories for PAST
Users that are interested in PAST are comparing it to the libraries listed below
Sorting:
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆38Updated last year
- Single Cell Multi-omics deep clustering☆28Updated 4 months ago
- ☆30Updated 2 years ago
- StereoMM is a graph fusion model that can integrate gene expression, histological images, and spatial location. And the information inter…☆37Updated 5 months ago
- overview of spatial datasets☆76Updated last year
- domain adaptation of spatial and single-cell transcriptome☆27Updated last year
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆33Updated 2 years ago
- ☆21Updated last year
- SPROD: Spatial expression profiling de-noising☆37Updated 2 years ago
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆72Updated 9 months ago
- ☆15Updated 4 months ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆71Updated last year
- ☆30Updated 2 years ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆40Updated 9 months ago
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆42Updated 2 months ago
- ☆18Updated last year
- ☆60Updated last year
- The benchmarking of spatial transcriptomics deconvolution methods☆33Updated 2 years ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆26Updated last year
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆33Updated 6 months ago
- PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.☆28Updated last year
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆46Updated last year
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆11Updated 2 months ago
- Predict RNA velocity through deep learning☆70Updated last year
- Awesome list of tools and methods to perform spatial transcriptomic data analysis.☆46Updated 4 years ago
- ☆40Updated 2 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆76Updated 3 years ago
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆13Updated last year
- ☆21Updated last year
- ☆50Updated last month