lizhen18THU / PASTLinks
PAST: a Prior-based self-Attention method for Spatial Transcriptomics
☆12Updated 7 months ago
Alternatives and similar repositories for PAST
Users that are interested in PAST are comparing it to the libraries listed below
Sorting:
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆37Updated last year
- ☆21Updated last year
- Single Cell Multi-omics deep clustering☆28Updated 3 months ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆32Updated 6 months ago
- The benchmarking of spatial transcriptomics deconvolution methods☆33Updated 2 years ago
- ☆21Updated last year
- ☆14Updated 3 months ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆33Updated 2 years ago
- domain adaptation of spatial and single-cell transcriptome☆27Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆48Updated 2 years ago
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆13Updated last year
- Matilda is a multi-task framework for learning from single-cell multimodal omics data. Matilda leverages the information from the multi-m…☆21Updated 4 months ago
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆72Updated 9 months ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆26Updated last year
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆39Updated 8 months ago
- ☆37Updated 4 months ago
- Spatial direct messaging detected by bivariate Moran☆30Updated 3 months ago
- ☆30Updated 2 years ago
- overview of spatial datasets☆76Updated last year
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆26Updated last year
- SoptSC for single cell data analysis: unsupervised inference of clustering, cell lineage, pseudotime and cell-cell communication network …☆22Updated 4 years ago
- ☆60Updated last year
- Reproducibility repository for the Human Neural Organoid Atlas publication☆39Updated 10 months ago
- ☆31Updated 7 months ago
- ☆17Updated 7 months ago
- Iterative transfer learning with neural network improves clustering and cell type classification in single-cell RNA-seq analysis☆55Updated 4 months ago
- Cell level integrated analysis of tissue histology and spatial transcriptomics☆22Updated last week
- ☆21Updated 3 years ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 8 months ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆71Updated last year