sldyns / scAceLinks
scAce: an adaptive embedding and clustering method for scRNA-seq data
☆12Updated 2 years ago
Alternatives and similar repositories for scAce
Users that are interested in scAce are comparing it to the libraries listed below
Sorting:
- overview of spatial datasets☆78Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆49Updated 2 years ago
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆16Updated 6 months ago
- Multi-Layer Network Model leverages identification of spatial domains from spatial transcriptomics data☆12Updated last year
- an SRT simulator for simulating multiple spatial variability in spatial resolved transcriptomics and generating unbiased simulated SRT da…☆26Updated 11 months ago
- End-to-end analysis of spatial multi-omics data☆102Updated 2 weeks ago
- ☆15Updated 7 months ago
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆39Updated 3 years ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆29Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆62Updated 2 years ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆41Updated last year
- Single-cell biological network inference using a heterogeneous graph transformer☆76Updated 11 months ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆77Updated last year
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆17Updated last week
- ☆21Updated last year
- ☆30Updated 2 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆80Updated 3 years ago
- ☆52Updated 4 months ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆50Updated last year
- CAST package☆42Updated last year
- Cell clustering for spatial transcriptomics data with graph neural network☆64Updated 2 years ago
- Spatial-Linked Alignment Tool☆90Updated last year
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆32Updated 2 years ago
- ☆31Updated 2 years ago
- ☆60Updated last year
- ☆47Updated 6 months ago
- Additional code and analysis from the single-cell integration benchmarking project☆71Updated 3 years ago
- ☆17Updated 10 months ago
- ☆16Updated 3 years ago
- ☆35Updated 3 years ago