scAce: an adaptive embedding and clustering method for scRNA-seq data
☆12Sep 8, 2023Updated 2 years ago
Alternatives and similar repositories for scAce
Users that are interested in scAce are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Nov 19, 2023Updated 2 years ago
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆18May 26, 2026Updated 2 weeks ago
- Implementation for Phenotype prediction from single-cell RNA-seq data using attention-based neural networks (Bioinformatics 2024).☆13Jul 15, 2024Updated last year
- ☆15Jun 17, 2021Updated 4 years ago
- A Guide to the Analysis of Spatial Transcriptomics☆12Jul 29, 2024Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Single-cell biological network inference using a heterogeneous graph transformer☆77Feb 24, 2025Updated last year
- Multi-omics data analysis for rare population inference using single-cell graph transformer☆23Nov 5, 2025Updated 7 months ago
- Automatic annotation of single-cell RNA-seq data from the literature☆48Jul 20, 2025Updated 10 months ago
- ☆70Nov 6, 2024Updated last year
- Research Paper: "Graph Contrastive Learning as a Versatile Foundation for Advanced scRNA-seq Data Analysis"☆10Nov 20, 2024Updated last year
- ☆24Nov 6, 2021Updated 4 years ago
- Single Cell Multi-omics deep clustering☆30Jul 1, 2025Updated 11 months ago
- Build contrasts for models defined with formulaic☆13Updated this week
- Multi-Layer Network Model leverages identification of spatial domains from spatial transcriptomics data☆13Aug 25, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- [ICCAD 2025] Squant☆15Jul 3, 2025Updated 11 months ago
- Biological Information Extraction from Large Language Models (LLMs) (Journal of Computational Biology 2025)☆13Jun 18, 2025Updated 11 months ago
- ☆30Apr 11, 2023Updated 3 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Mar 25, 2024Updated 2 years ago
- CLEAR: Self-supervised contrastive learning for integrative single-cell RNA-seq data analysis☆34Nov 30, 2022Updated 3 years ago
- Heterogeneous Causal Metapath Graph Neural Network for Gene-Microbe-Disease Association Prediction☆12Aug 19, 2024Updated last year
- ☆11Jun 13, 2024Updated last year
- ☆19Dec 1, 2021Updated 4 years ago
- ☆13Jan 23, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The release version of OMCmf code for paper "One-pass Multi-view Clustering with Matrix Factorization"☆14Nov 30, 2021Updated 4 years ago
- "Topological Identification and Interpretation for Single-cell Gene Regulation Elucidation across Multiple Platforms using scMGCA" in Nat…☆18Feb 5, 2023Updated 3 years ago
- A Spatial Transcriptomics Geospatial Profile Recovery System Tool through Anchors☆19Jul 24, 2025Updated 10 months ago
- SAME (Single-cell RNA-seq Aggregated clustering via Mixture model Ensemble): Cluster ensemble for single-cell RNA-seq data☆16May 4, 2021Updated 5 years ago
- a simply crawler framework☆12Jun 5, 2023Updated 3 years ago
- Identification and targeting of treatment resistant progenitor populations in T-cell Acute Lymphoblastic Leukemia☆15May 16, 2024Updated 2 years ago
- scDCC: Single Cell Deep Constrained Clustering☆45Jul 10, 2024Updated last year
- [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model☆24Mar 12, 2025Updated last year
- ☆18Oct 22, 2024Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Supplementary information for "Population-level comparisons of gene regulatory networks modeled on high-throughput single-cell transcript…☆11Jan 15, 2024Updated 2 years ago
- ☆21Nov 12, 2025Updated 7 months ago
- ☆14Jan 24, 2024Updated 2 years ago
- Pytorch implementation of Influence Augmented Contrastive (IAC) loss and SCGC : Self-Supervised Contrastive Graph Clustering (https://a…☆26Apr 28, 2022Updated 4 years ago
- An English to American Sign Language translator.☆23Sep 1, 2022Updated 3 years ago
- matlab code for AAAI16:Multiple Kernel k-Means Clustering with Matrix-Induced Regularization☆11Sep 18, 2019Updated 6 years ago
- [CVPR'24 Highlight] Implementation of "Causal-CoG: A Causal-Effect Look at Context Generation for Boosting Multi-modal Language Models"☆17Sep 12, 2024Updated last year