tabdelaal / SpaGELinks
Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data
☆39Updated last year
Alternatives and similar repositories for SpaGE
Users that are interested in SpaGE are comparing it to the libraries listed below
Sorting:
- ☆50Updated last month
- domain adaptation of spatial and single-cell transcriptome☆28Updated last year
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆33Updated 7 months ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆41Updated 10 months ago
- Bayesian Analytics for Spatial Segmentation☆30Updated 7 months ago
- ☆31Updated 9 months ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆25Updated last year
- ☆45Updated 4 months ago
- Spatial direct messaging detected by bivariate Moran☆31Updated 4 months ago
- ☆60Updated last year
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆22Updated 2 years ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆96Updated 9 months ago
- ☆61Updated 2 years ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆33Updated 2 years ago
- CAST package☆41Updated last year
- The benchmarking of spatial transcriptomics deconvolution methods☆33Updated 2 years ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 9 months ago
- ☆56Updated last year
- End-to-end analysis of spatial multi-omics data☆97Updated last month
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆48Updated last year
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆74Updated last year
- Reproducing result from the paper☆34Updated 4 years ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆41Updated 9 months ago
- Detect hierarchical structures in cell-cell communications☆16Updated 10 months ago
- Spatially resolved transcriptomic analysis☆61Updated 3 years ago
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆15Updated last month
- ☆127Updated 3 years ago
- ☆31Updated 2 years ago
- ☆34Updated 7 months ago
- SPROD: Spatial expression profiling de-noising☆36Updated 2 years ago