tabdelaal / SpaGELinks
Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data
☆38Updated last year
Alternatives and similar repositories for SpaGE
Users that are interested in SpaGE are comparing it to the libraries listed below
Sorting:
- ☆50Updated last month
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆25Updated last year
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆40Updated 9 months ago
- Spatial direct messaging detected by bivariate Moran☆31Updated 3 months ago
- ☆45Updated 3 months ago
- Bayesian Analytics for Spatial Segmentation☆30Updated 6 months ago
- ☆60Updated last year
- CAST package☆40Updated last year
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆22Updated 2 years ago
- domain adaptation of spatial and single-cell transcriptome☆28Updated last year
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆96Updated 8 months ago
- ☆31Updated 8 months ago
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆26Updated last year
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆33Updated 7 months ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 9 months ago
- The benchmarking of spatial transcriptomics deconvolution methods☆33Updated 2 years ago
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆14Updated last month
- ☆33Updated 7 months ago
- ☆60Updated 2 years ago
- GASTON: deep learning algorithm learns "topography" of a tissue slice from spatial transcriptomics data☆63Updated 4 months ago
- UniCell Deconvolve Paper☆10Updated 2 years ago
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆72Updated 9 months ago
- ☆52Updated 4 years ago
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆11Updated 2 months ago
- Spatially resolved transcriptomic analysis☆61Updated 2 years ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆40Updated 8 months ago
- ☆15Updated 4 months ago
- ☆30Updated 2 years ago
- ☆56Updated last year
- SPROD: Spatial expression profiling de-noising☆37Updated 2 years ago