tabdelaal / SpaGELinks
Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data
☆35Updated 11 months ago
Alternatives and similar repositories for SpaGE
Users that are interested in SpaGE are comparing it to the libraries listed below
Sorting:
- ☆48Updated last week
- domain adaptation of spatial and single-cell transcriptome☆27Updated 8 months ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆23Updated last year
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆24Updated 7 months ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆35Updated 3 months ago
- Bayesian Analytics for Spatial Segmentation☆28Updated 3 weeks ago
- CAST package☆38Updated 7 months ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆29Updated last month
- Spatial direct messaging detected by bivariate Moran☆26Updated last month
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆13Updated last year
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 3 months ago
- ☆29Updated 3 months ago
- ☆21Updated 11 months ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆41Updated last year
- UniCell Deconvolve Paper☆10Updated 2 years ago
- Reproducing result from the paper☆33Updated 4 years ago
- The benchmarking of spatial transcriptomics deconvolution methods☆31Updated 2 years ago
- Probabilistic Alignment of Spatial Transcriptomics Experiments v.2☆34Updated 3 months ago
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆26Updated 6 months ago
- ☆45Updated 2 years ago
- GASTON: deep learning algorithm learns "topography" of a tissue slice from spatial transcriptomics data☆53Updated 4 months ago
- ☆37Updated 2 years ago
- SPROD: Spatial expression profiling de-noising☆36Updated last year
- ☆28Updated last year
- ☆57Updated 10 months ago
- Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics☆35Updated 3 weeks ago
- Spatial Cellular Estimator for Tumors☆52Updated last week
- Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information☆21Updated 2 years ago
- ☆26Updated last year