dchary / ucdeconvolve_paperLinks
UniCell Deconvolve Paper
☆10Updated 2 years ago
Alternatives and similar repositories for ucdeconvolve_paper
Users that are interested in ucdeconvolve_paper are comparing it to the libraries listed below
Sorting:
- ☆60Updated last year
- ☆31Updated 8 months ago
- UniCell Deconvolve - Cloud Cell Type Deconvolution For Transcriptomic Data☆26Updated 2 years ago
- Code used to benchmark Xenium☆70Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆38Updated last year
- a computational framework to identify and characterize cell niches from spatial omics data at single-cell resolution☆42Updated 2 months ago
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆25Updated last year
- Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data☆72Updated 9 months ago
- Bayesian Analytics for Spatial Segmentation☆30Updated 6 months ago
- Detect hierarchical structures in cell-cell communications☆15Updated 9 months ago
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆40Updated 9 months ago
- Deep fusion of spatial transcriptomics and histology images for interpretable high-definition embedding mapping☆11Updated 2 months ago
- Spatial Cellular Estimator for Tumors☆58Updated 3 weeks ago
- ☆50Updated 3 weeks ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆35Updated 8 months ago
- This repository includes codes and data example used in the "Integrative Spatial Analysis Reveals Tumor Heterogeneity and Immune Colon…☆14Updated 5 months ago
- CAST package☆40Updated last year
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆33Updated 6 months ago
- ☆124Updated last year
- Spatial transcriptome analysis in python☆24Updated 9 months ago
- TACCO: Transfer of Annotations to Cells and their COmbinations☆61Updated 2 months ago
- End-to-end analysis of spatial multi-omics data☆95Updated 3 months ago
- ☆125Updated 3 years ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆57Updated last week
- Repository for ENACT pipeline for end-to-end analysis of Visium HD data☆68Updated 4 months ago
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆14Updated last month
- Predict RNA velocity through deep learning☆70Updated last year
- The benchmarking of spatial transcriptomics deconvolution methods☆33Updated 2 years ago
- overview of spatial datasets☆76Updated last year
- Spatial direct messaging detected by bivariate Moran☆30Updated 3 months ago