dchary / ucdeconvolve_paper
UniCell Deconvolve Paper
☆10Updated last year
Alternatives and similar repositories for ucdeconvolve_paper:
Users that are interested in ucdeconvolve_paper are comparing it to the libraries listed below
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆22Updated 3 months ago
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆33Updated 6 months ago
- ☆18Updated 2 weeks ago
- UniCell Deconvolve - Cloud Cell Type Deconvolution For Transcriptomic Data☆22Updated last year
- Integrative and Reference-Informed Spatial Domain Detection for Spatial Transcriptomics☆30Updated this week
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆42Updated last year
- an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…☆22Updated last year
- ☆44Updated 8 months ago
- code and dataset for spatialDWLS☆12Updated 3 years ago
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆11Updated 4 months ago
- Spatial Cellular Estimator for Tumors☆47Updated 2 weeks ago
- ☆16Updated this week
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- Spatial transcriptome analysis in python☆22Updated this week
- Spatial direct messaging detected by bivariate Moran☆24Updated 2 weeks ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆22Updated 2 weeks ago
- CeLEry: cell location recovery in single-cell RNA sequencing☆32Updated last week
- Data processing and analysis workflow for GAGE-seq, a coassay of single-cell HiC and single-cell RNA-seq☆11Updated 10 months ago
- The first computational tool that enables both unsupervised and supervised discovery of tissue spatial domains☆26Updated 11 months ago
- MARIO: single-cell proteomic data matching and integration using both shared and distinct features☆22Updated last year
- Code used to benchmark Xenium☆42Updated 7 months ago
- Bayesian Analytics for Spatial Segmentation☆22Updated 3 months ago
- domain adaptation of spatial and single-cell transcriptome☆25Updated 4 months ago
- Deciphering cell-cell communication from spatially resolved transcriptomic data at single-cell resolution with subgraph-based attentional…☆21Updated 4 months ago
- ☆39Updated this week
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆22Updated last year
- ☆18Updated 5 months ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆26Updated 3 years ago
- Reproducing result from the paper☆33Updated 3 years ago
- ESICCC: A systematic computational framework for evaluation, selection and integration of cell-cell communication inference methods☆12Updated last year