biomed-AI / ConGI
☆12Updated last year
Alternatives and similar repositories for ConGI:
Users that are interested in ConGI are comparing it to the libraries listed below
- ☆16Updated last year
- ☆39Updated last year
- Identify spatial domain☆72Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆73Updated 3 years ago
- conST: an interpretable multi-modal contrastive learning framework for spatial transcriptomics☆26Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆45Updated 2 years ago
- ☆34Updated 11 months ago
- ☆115Updated last year
- ☆55Updated 6 months ago
- Cell clustering for spatial transcriptomics data with graph neural network☆62Updated 2 years ago
- STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages☆22Updated last year
- ☆27Updated last year
- An offical repo for paper "Single-cells are Spatial Tokens: Transformers for Spatially Resolved Transcriptomics Data Imputation"☆17Updated last year
- Pytorch implementation of scDeepCluster for Single Cell RNA-seq data☆32Updated 9 months ago
- ☆56Updated 9 months ago
- Deep joint-leaning single-cell multi-omics model☆16Updated 2 years ago
- Her2 Breast Cancer Project☆72Updated 2 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆56Updated last year
- overview of spatial datasets☆75Updated last year
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆58Updated 10 months ago
- scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder☆16Updated 3 years ago
- a unified single-cell data integration framework by optimal transport☆35Updated 7 months ago
- Single-cell spatial elucidation through image-augmented graph transformer☆31Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆34Updated 10 months ago
- A novel method named stDiff investigates the potential of employing diffusion models for single-cell omics generation.☆18Updated last year
- ☆10Updated last year
- Bayesian Analytics for Spatial Segmentation☆27Updated this week
- ☆40Updated 3 years ago
- ☆21Updated 8 months ago
- domain adaptation of spatial and single-cell transcriptome☆27Updated 7 months ago