cs-wangbo / Spatial-MGCN
☆15Updated 11 months ago
Related projects ⓘ
Alternatives and complementary repositories for Spatial-MGCN
- Identify spatial domain☆59Updated last year
- An offical repo for paper "Single-cells are Spatial Tokens: Transformers for Spatially Resolved Transcriptomics Data Imputation"☆16Updated last year
- Single-cell spatial elucidation through image-augmented graph transformer☆31Updated last year
- ☆91Updated 8 months ago
- STAligner: Integrating spatial transcriptomics data across different conditions, technologies, and developmental stages☆19Updated 10 months ago
- conST: an interpretable multi-modal contrastive learning framework for spatial transcriptomics☆25Updated 9 months ago
- Cell clustering for spatial transcriptomics data with graph neural network☆58Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆38Updated last year
- ☆34Updated 11 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆63Updated 2 years ago
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆13Updated last week
- ☆16Updated 3 months ago
- ☆25Updated 5 months ago
- Deep joint-leaning single-cell multi-omics model☆16Updated 2 years ago
- A Transformer Model Exploiting Histology Images and Spatial Gene Expression☆12Updated 7 months ago
- PAST: a Prior-based self-Attention method for Spatial Transcriptomics☆12Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆46Updated last year
- ☆45Updated 2 weeks ago
- ☆11Updated 7 months ago
- Multi-omics data analysis for rare population inference using single-cell graph transformer☆17Updated 6 months ago
- a unified single-cell data integration framework by optimal transport☆31Updated last month
- Single Cell Multi-omics deep clustering☆24Updated 9 months ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆29Updated 7 months ago
- SpatialGlue is a novel deep learning methods for spatial multi-omics data integration.☆41Updated 4 months ago
- scAce: an adaptive embedding and clustering method for scRNA-seq data☆11Updated last year
- ☆26Updated 9 months ago
- Pytorch implementation of scDeepCluster for Single Cell RNA-seq data☆30Updated 4 months ago
- Single-cell biological network inference using a heterogeneous graph transformer☆67Updated last year
- ☆21Updated 3 years ago
- ☆40Updated 7 months ago