slowkow / cellguideLinks
π§ Navigate single-cell RNA-seq datasets in your web browser.
β29Updated 2 years ago
Alternatives and similar repositories for cellguide
Users that are interested in cellguide are comparing it to the libraries listed below
Sorting:
- Explore the cancer relevance of your gene listβ51Updated 5 months ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seqβ31Updated 4 years ago
- Model-based subclonal deconvolution from bulk sequencing.β33Updated this week
- Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.β28Updated 4 years ago
- scoverβ23Updated last year
- 𧬠π¦ A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.β¦β28Updated 3 years ago
- β14Updated 6 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.β29Updated last year
- An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portalβ14Updated last week
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneitβ¦β37Updated last year
- Pipeline for the identification of cancer-related mutations from RNA-seq dataβ14Updated 4 years ago
- ireadβ25Updated 4 years ago
- β10Updated 6 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq dataβ25Updated last year
- R package for haplotype phasing using single-cell RNA-seq dataβ13Updated 8 years ago
- Trans-association between HLA and TCR-CDR3β18Updated 2 years ago
- Repository for signature genes from Immune Cell Atlasβ18Updated 5 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.β16Updated 6 years ago
- SCASA: Single cell transcript quantification toolβ21Updated last year
- kallisto index tag extractorβ20Updated 6 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer driversβ15Updated 6 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq dataβ43Updated 3 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platformsβ18Updated 2 years ago
- Single cell interactive plotting toolsβ23Updated 5 years ago
- β12Updated last year
- A simple, intuitive and Efficient single cell binary Data Storage formatβ15Updated 5 years ago
- CNAqc - Copy Number Alteration (CNA) Quality Check packageβ22Updated 3 months ago
- β17Updated last year
- Inferring gene co-expression networks from single cell gene expression dataβ28Updated 3 years ago
- Differential ATAC-seq toolkitβ27Updated last year