🧭 Navigate single-cell RNA-seq datasets in your web browser.
☆32Jul 13, 2023Updated 2 years ago
Alternatives and similar repositories for cellguide
Users that are interested in cellguide are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Two or three subtypes of high grade serous ovarian cancer subtypes fit data from different populations better than four☆12Oct 10, 2018Updated 7 years ago
- Allele frequency filter app☆14May 4, 2022Updated 3 years ago
- ☆12Dec 1, 2021Updated 4 years ago
- Visualize cancer genomes with FAIR single-cell RNA-seq data☆13Jan 5, 2023Updated 3 years ago
- MEM mapper prototype☆13Nov 28, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆15Mar 27, 2026Updated last month
- Multi-sample Unified Discriminant ANalysis☆75Apr 11, 2023Updated 3 years ago
- Pipeline for generating RNAseq-based cancer patient reports☆12Apr 15, 2026Updated 2 weeks ago
- Modular & interactive analysis components for bioinformatics☆18Dec 9, 2025Updated 4 months ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Feb 17, 2022Updated 4 years ago
- sake☆29Feb 8, 2023Updated 3 years ago
- Cell type matching in single-cell RNA-sequencing data using FR-Match☆20Feb 16, 2026Updated 2 months ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆94Dec 18, 2024Updated last year
- NGS perl modules☆10Apr 23, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A minimal copy fastq and fasta reader built for parallel support and paired end processing☆42Apr 24, 2026Updated last week
- a lexicographically-based GTF/GFF sorter☆38Mar 16, 2026Updated last month
- Single cell analysis in the browser☆157Mar 26, 2026Updated last month
- ☆15Jun 3, 2019Updated 6 years ago
- ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.☆21Sep 1, 2021Updated 4 years ago
- Instructions and analysis scripts for single cell Higher Order Testing (scHOT)☆10Oct 7, 2020Updated 5 years ago
- Fast interval intersection library☆44Aug 20, 2025Updated 8 months ago
- Functional Annotation for Single-Cell Transcriptomics☆12Jun 29, 2024Updated last year
- Single cell interactive plotting tools☆24Jun 12, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Utilities for large scale distributed single cell data processing☆24Jan 20, 2026Updated 3 months ago
- GESTALT processing pipeline for barcodes captured with single-cell RNA sequencing☆13Jan 26, 2020Updated 6 years ago
- ☆16Mar 18, 2025Updated last year
- When Expectations Meet Reality: Realistic Unit Testing in R☆12Jul 11, 2024Updated last year
- Immunology-related bioinformatics data and tools☆76Apr 30, 2024Updated 2 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- Scripts to help get fastqs☆19Feb 24, 2026Updated 2 months ago
- Draw phylogenetic trees of tumor evolution☆87Jul 21, 2023Updated 2 years ago
- Bayesian Markov Model motif discovery tool version 2 - An expectation maximization algorithm for the de novo discovery of enriched motifs…☆16Feb 1, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Single-cell Lung Cancer Atlas with 1.2M cells☆92Jan 19, 2025Updated last year
- Simple utilities to manage R environments☆16Apr 19, 2024Updated 2 years ago
- Retrieve GitHub Stars for any Repository☆14May 31, 2020Updated 5 years ago
- Error correction and variant calling algorithm for nanopore sequencing☆26Apr 23, 2016Updated 10 years ago
- Extracts fastq reads for specified barcode(s) from one or multiple FASTQ files☆13Jan 31, 2016Updated 10 years ago
- The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.☆35Oct 7, 2024Updated last year
- Analysis pipeline for the identification of viral integration events in genomes using a chimeric read approach.☆18Jun 3, 2025Updated 10 months ago