mm-shah / MetaNeighborLinks
A method to rapidly assess cell type identity using both functional and random gene sets
☆13Updated 6 years ago
Alternatives and similar repositories for MetaNeighbor
Users that are interested in MetaNeighbor are comparing it to the libraries listed below
Sorting:
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 2 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- ☆14Updated 6 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated 11 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 2 months ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- Single cell interactive plotting tools☆23Updated 5 years ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- R package for benchmarking single cell analysis methods☆31Updated last year
- Batch Effect Correction of RNA-seq Data through Sample Distance Matrix Adjustment☆18Updated 4 years ago
- R package for gene selection using k-NN graphs.☆13Updated 2 years ago
- Code used for the single-cell RNA-Seq batch effects paper☆10Updated 7 years ago
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆10Updated 6 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆45Updated 2 years ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Updated 6 years ago
- Exon-Intron Split Analysis (EISA) in R☆16Updated last month
- ☆12Updated last year
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago
- ☆12Updated 5 years ago
- Collection of useful methods for single cell analysis☆14Updated 10 months ago
- Code for EpiMap data browser☆14Updated last year
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data