A method to rapidly assess cell type identity using both functional and random gene sets
☆15May 2, 2019Updated 7 years ago
Alternatives and similar repositories for MetaNeighbor
Users that are interested in MetaNeighbor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- scRNA-seq data visualization from scrattch☆30Aug 20, 2025Updated last year
- Weighted gene co-expression network analysis for scRNA-seq data in Seurat☆10Dec 15, 2023Updated 2 years ago
- ☆28Feb 6, 2019Updated 7 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆27May 12, 2020Updated 6 years ago
- ☆10Feb 12, 2019Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆27May 29, 2023Updated 3 years ago
- Pathway-Level Single-Cell Functional Profiling of Individual Patient Samples☆11Aug 6, 2025Updated last year
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆13Jun 11, 2019Updated 7 years ago
- Harvard FAS informatics scRNAseq workshop website☆40Aug 8, 2019Updated 7 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Jan 6, 2021Updated 5 years ago
- ☆27Apr 18, 2018Updated 8 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Jun 29, 2023Updated 3 years ago
- Workflows for comparative analyses of single-cell RNA sequencing data, migrated to the OSCA book.☆11May 15, 2019Updated 7 years ago
- A comprehensive command-line based pipeline for the analysis of direct injection FT-ICR mass spectrometry data☆14Jul 13, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Inference of switch-like differential expression along single-cell trajectories☆23Oct 24, 2017Updated 9 years ago
- ☆22Mar 16, 2019Updated 7 years ago
- Reconstructing single-cell lineage history using mitochondrial mutation drift dynamics☆13Aug 22, 2026Updated 2 months ago
- Repo for website and other code for mouse sci-ATAC-seq project☆30Oct 1, 2020Updated 6 years ago
- ☆15Oct 19, 2023Updated 3 years ago
- Cell signatures, with confidence.☆10Jun 1, 2020Updated 6 years ago
- Repository for scRNAseq study of human kidneys☆15Jun 14, 2019Updated 7 years ago
- ☆12May 30, 2023Updated 3 years ago
- Predict cell cycle phase in a continuum from single-cell RNA-seq data☆14Nov 14, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Scripts related to VISp and ALM scRNA-seq and FISH analysis for Tasic, et al., 2018.☆24Jun 15, 2018Updated 8 years ago
- Single cell RNA-seq analysis for transcriptomic type characterization☆43Apr 7, 2026Updated 6 months ago
- Predicting transcription factor binding in single cells through deep learning☆15Oct 14, 2022Updated 4 years ago
- Build predicted cell-cell interaction networks from single-cell data.☆10Jan 31, 2023Updated 3 years ago
- Repo for scripts for Ludwig et al mtDNA genotyping☆16Nov 22, 2019Updated 6 years ago
- ☆50Mar 1, 2018Updated 8 years ago
- PHATE dimensionality reduction method implemented in R☆83Feb 11, 2021Updated 5 years ago
- Explore and share your scRNAseq clustering results☆53Sep 6, 2023Updated 3 years ago
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆22Feb 10, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Reconstruction of complex single-cell trajectories using CellRouter☆46Dec 14, 2018Updated 7 years ago
- ☆65Mar 18, 2025Updated last year
- Analysis of Single Cell Expression, Normalization and Differential expression☆14Feb 29, 2020Updated 6 years ago
- scID☆14Oct 21, 2021Updated 5 years ago
- ☆11Jun 23, 2026Updated 4 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆38Jul 5, 2021Updated 5 years ago
- An R library for conducting analyses on COMPASS data.☆20Jun 10, 2021Updated 5 years ago