R-code used for single-cell RNA-Seq analysis of kidney data.
☆18Oct 17, 2019Updated 6 years ago
Alternatives and similar repositories for Single-cell-RNA-sequencing-of-human-kidney
Users that are interested in Single-cell-RNA-sequencing-of-human-kidney are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The following repository contains code for all scRNAseq analysis and visualization performed in the paper: Single cell resolution analysi…☆17Oct 22, 2021Updated 4 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆31Feb 17, 2023Updated 3 years ago
- Comparison of single cell normalization strategies☆10Aug 13, 2021Updated 4 years ago
- single cell sequencing analysis tutorial☆18Jan 15, 2020Updated 6 years ago
- ☆11May 25, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Identified novel mouse spermatogenesis biomarkers based on single-cell RNA sequencing data☆11Jun 7, 2022Updated 3 years ago
- Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs☆39Jan 14, 2024Updated 2 years ago
- Analysis of single cell RNA-seq data from innate lympoid cells☆15Aug 8, 2017Updated 8 years ago
- Tumour Heterogeneity and Intercellular Networks of Nasopharyngeal Carcinoma at Single Cell Resolution☆13Mar 1, 2023Updated 3 years ago
- Predicting transcription factor binding in single cells through deep learning☆13Oct 14, 2022Updated 3 years ago
- Code and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…☆10Apr 16, 2020Updated 5 years ago
- R package for single-cell RNA-sequencing analysis☆15Sep 30, 2025Updated 6 months ago
- Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"☆27Jun 5, 2018Updated 7 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Dec 7, 2018Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- R package☆27Aug 16, 2020Updated 5 years ago
- Raw data and analysis of scRNA Seq experiments for the paper Multimodal Mapping of the Immune Landscape in Human Pancreatic Cancer. This …☆15Nov 30, 2020Updated 5 years ago
- ☆10Apr 6, 2022Updated 3 years ago
- R code for single-cell analysis of intestinal epithelial cells☆23Nov 18, 2017Updated 8 years ago
- An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data☆13Jul 2, 2024Updated last year
- Differential gene expression analysis on RNA-seq data☆13Apr 26, 2024Updated last year
- R package for benchmarking single cell analysis methods☆32Oct 4, 2023Updated 2 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆49Apr 21, 2025Updated 11 months ago
- ☆11Sep 23, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Functional code templates for the Star Protocols paper describing consolidated WES variant calling with 3 callers☆10Oct 18, 2024Updated last year
- ☆114Sep 16, 2020Updated 5 years ago
- 采用开源论坛系统Flarum建设GATK中文社区,该论坛所有帖子将以markdown代码形式发帖,所有的markdown源代码都会同步存放在此github的organization的这个project下面。GATK中文社区地址是:https://www.gatk.com.…☆17Oct 21, 2017Updated 8 years ago
- Basics of the OSCA book☆14Sep 29, 2025Updated 6 months ago
- scDissector is an exploratory data analysis tool for clustered single-cell RNA-seq data. The tool has been developed and implemented as R…☆19Jul 21, 2023Updated 2 years ago
- ☆10Sep 28, 2017Updated 8 years ago
- Analysis of RNA seq data to explore gene expression in different types of cancer☆11Oct 5, 2018Updated 7 years ago
- Single cell RNA analysis about paper “Caloric restriction reprograms the single-cell transcriptional landscape of Rattus norvegicus aging…☆29Jan 3, 2020Updated 6 years ago
- BioPerl scripts and utilities☆11Sep 2, 2025Updated 6 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A benchmark of batch-effect correction methods for single-cell RNA sequencing data☆79Jan 24, 2022Updated 4 years ago
- ☆12May 20, 2022Updated 3 years ago
- ☆18Feb 18, 2021Updated 5 years ago
- ☆10Dec 14, 2016Updated 9 years ago
- Viral Identification and Discovery - A viral characterization pipeline built in Nextflow.☆11May 19, 2020Updated 5 years ago
- scRNAseq clustering tool☆11Apr 14, 2020Updated 5 years ago
- Harvard FAS informatics scRNAseq workshop website☆39Aug 8, 2019Updated 6 years ago