HannesStark / CodonMPNN
☆23Updated 3 weeks ago
Related projects ⓘ
Alternatives and complementary repositories for CodonMPNN
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆26Updated this week
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆32Updated 2 months ago
- Generative diverse protein backbones by protein language model☆24Updated 3 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆30Updated 5 months ago
- ☆20Updated last month
- This repository implements Gibbs sampling with Graph-based Smoothing☆34Updated 5 months ago
- ☆23Updated 2 weeks ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆20Updated 3 weeks ago
- ☆17Updated last month
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆11Updated this week
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆29Updated last year
- ☆38Updated last month
- ML-optimized library design with improved fitness and diversity for protein engineering☆23Updated 3 months ago
- ☆35Updated 10 months ago
- ☆11Updated 3 weeks ago
- Code for deep learning guided design of dynamic proteins☆16Updated 3 months ago
- Structure-Informed Protein Language Model☆26Updated 8 months ago
- Code for humanization of antibody and nanobody☆22Updated 2 weeks ago
- ☆38Updated 7 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆33Updated 4 months ago
- ☆18Updated 2 weeks ago
- Latent-based Directed Evolution guided by Gradient Ascent for Protein Design☆22Updated 6 months ago
- CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes☆23Updated last week
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆19Updated 3 months ago
- This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.☆21Updated last year
- Tool for modelling the CDRs of antibodies☆32Updated 2 years ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆25Updated last month
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆31Updated this week