☆31Dec 12, 2024Updated last year
Alternatives and similar repositories for CodonMPNN
Users that are interested in CodonMPNN are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Protein representation and design under a single training scheme☆24Updated this week
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆74Jul 2, 2025Updated 9 months ago
- Metal and Water prediction☆13Feb 5, 2025Updated last year
- ☆47Sep 16, 2024Updated last year
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆48Aug 5, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A conditionally adapted protein language model for the generation of enzymes☆23Nov 26, 2024Updated last year
- Aligning protein generative models with experimental fitness☆120Mar 12, 2026Updated last month
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 5 months ago
- Generative diverse protein backbones by protein language model☆34Feb 27, 2026Updated 2 months ago
- Adapting protein language models for structure-conditioned design☆42Aug 5, 2024Updated last year
- Official repository of GENzyme☆63Nov 29, 2024Updated last year
- Sequences from Adaptyv Bio’s EGFR Protein Design Competition☆16Aug 28, 2025Updated 8 months ago
- Homomer symmetry prediction from protein sequence☆44Mar 13, 2025Updated last year
- ☆12Sep 13, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆33Feb 5, 2025Updated last year
- Structure-conditioned masked language modeling for protein sequence design☆73Jan 31, 2024Updated 2 years ago
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆242Nov 5, 2025Updated 5 months ago
- Multimodal encoder-only transformer model for image-based protein predictions☆15Dec 12, 2023Updated 2 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆71Feb 21, 2026Updated 2 months ago
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆285Dec 10, 2024Updated last year
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆91Apr 10, 2026Updated 3 weeks ago
- ☆42Jun 12, 2025Updated 10 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 5 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- LatentDE: Latent-based Directed Evolution for Protein Sequence Design☆38Apr 2, 2025Updated last year
- ☆23Nov 6, 2024Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆89Jun 23, 2024Updated last year
- ☆97Apr 16, 2026Updated 2 weeks ago
- Making Protein Language Modeling Accessible to All Biologists☆161Updated this week
- ☆86Feb 11, 2026Updated 2 months ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆14Nov 14, 2025Updated 5 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆125Aug 3, 2025Updated 8 months ago
- ☆39Mar 30, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆186Apr 21, 2024Updated 2 years ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Jan 24, 2024Updated 2 years ago
- Official repository of EnzymeFlow☆101Dec 7, 2024Updated last year
- Metrics to evaluate distributional coverage of generative models of protein structures.☆21Aug 13, 2025Updated 8 months ago
- ☆15Jun 3, 2025Updated 10 months ago
- Deep Learning Library and Benchmark for Protein Sequence Learning (Bioinformatics 2025)☆43Mar 30, 2026Updated last month
- Implementation of NeurIPS24 paper "Generalized Protein Pocket Generation with Prior-Informed Flow Matching"☆21May 15, 2025Updated 11 months ago