Alternatives and similar repositories for ModeShapeDiffusionDesign

Users that are interested in ModeShapeDiffusionDesign are comparing it to the libraries listed below

• gitter-lab / metl-pretrained
  Pretrained METL models with minimal dependencies
  ☆16Updated 3 months ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆33Updated 2 years ago
• ProteinDesignLab / protein_shapes
  Metrics to evaluate distributional coverage of generative models of protein structures.
  ☆18Updated 4 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆35Updated last year
• mgreenig / loopgen
  SE(3) diffusion models for generating CDR loops
  ☆10Updated last year
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆34Updated last month
• KoubaPetr / Flexpert
  Code for the paper "Learning to engineer protein flexibility".
  ☆22Updated last month
• HannesStark / CodonMPNN
  ☆29Updated last year
• ComputationalBiologyLab-IIITH / HYDRA
  ☆10Updated last year
• Gonglab-THU / GDFold2
  ☆17Updated 11 months ago
• HySonLab / Protein_Redesign
  ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models
  ☆39Updated last year
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆35Updated last year
• HySonLab / Ligand_Generation
  Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning
  ☆31Updated last year
• CDDLeiden / PCMol
  Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.
  ☆70Updated 8 months ago
• nohandsomewujun / FlowDesign
  ☆32Updated 4 months ago
• Profluent-Internships / ProCALM
  A conditionally adapted protein language model for the generation of enzymes
  ☆23Updated last year
• smiles724 / PeptideDesign
  ☆33Updated 2 weeks ago
• bzho3923 / CPDiffusion
  ☆25Updated last year
• lamm-mit / ProteinMechanicsDiffusionDesign
  ☆27Updated last year
• matsagad / mres-project
  Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.
  ☆11Updated last year
• ChenPy00 / PPB-Affinity
  Baseline model for PPB-Affinity benchmark data
  ☆34Updated 7 months ago
• THGLab / int2cart
  Building more accurate protein structures from backbone torsion angles
  ☆14Updated 9 months ago
• Huatsing-Lau / PPB-Affinity-DataPrepWorkflow
  workflow used to prepare PPB-Affinity database
  ☆28Updated last year
• Vincentx15 / atomsurf
  ☆24Updated last month
• mgreenig / IgCraft
  Versatile human antibody sequence design
  ☆21Updated 6 months ago
• ProteinDesignLab / protpardelle-1c
  Updated Protpardelle models with more robust motif scaffolding and multichain support
  ☆53Updated this week
• gitter-lab / metl-sim
  High-throughput framework for running molecular simulations for METL
  ☆21Updated 3 months ago
• kiharalab / Distance-AF
  Public version for Distance-AF
  ☆29Updated 4 months ago
• anirudhvenk / antibody-dpo
  ☆25Updated 7 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆57Updated 7 months ago