lamm-mit / ModeShapeDiffusionDesignLinks
☆17Updated 2 months ago
Alternatives and similar repositories for ModeShapeDiffusionDesign
Users that are interested in ModeShapeDiffusionDesign are comparing it to the libraries listed below
Sorting:
- SE(3) diffusion models for generating CDR loops☆10Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆32Updated 2 years ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆34Updated last year
- ☆10Updated last year
- Pretrained METL models with minimal dependencies☆15Updated 2 months ago
- ☆28Updated 11 months ago
- Generative diverse protein backbones by protein language model☆34Updated 3 weeks ago
- ☆11Updated last year
- Baseline model for PPB-Affinity benchmark data☆31Updated 6 months ago
- Metrics to evaluate distributional coverage of generative models of protein structures.☆17Updated 3 months ago
- ☆26Updated last year
- Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning☆31Updated last year
- ☆30Updated 5 months ago
- A conditionally adapted protein language model for the generation of enzymes☆23Updated 11 months ago
- Code for the paper "Learning to engineer protein flexibility".☆22Updated 2 months ago
- Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.☆68Updated 7 months ago
- A benchmark for 3D biomolecular structure prediction models☆67Updated 6 months ago
- workflow used to prepare PPB-Affinity database☆28Updated last year
- ☆31Updated 3 months ago
- Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.☆10Updated 11 months ago
- ☆17Updated 11 months ago
- ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models☆39Updated 11 months ago
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆48Updated this week
- Implementation of Protein Invariant Point Packer (PIPPack)☆35Updated last year
- Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop☆14Updated last year
- Versatile human antibody sequence design☆20Updated 5 months ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆50Updated last year
- ☆39Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 6 months ago
- ☆23Updated this week