Homomer symmetry prediction from protein sequence
☆46Mar 13, 2025Updated last year
Alternatives and similar repositories for seq2symm
Users that are interested in seq2symm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆33Dec 12, 2024Updated last year
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 11 months ago
- ☆17May 18, 2026Updated 5 months ago
- HBDesigner is an algorithm that designs highly-connected hydrogen bonding networks that fit the requested design constraints onto an inpu…☆22Oct 22, 2026Updated last week
- Official implementation of "Rigidity-Aware Geometric Pretraining for Protein Design and Conformational Ensembles" (ICLR 2026)☆20Mar 16, 2026Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆19Aug 31, 2025Updated last year
- Metal and Water prediction☆16Feb 5, 2025Updated last year
- bakerlab pymol scripts☆27Feb 6, 2020Updated 6 years ago
- random colab notebooks for biology☆25Aug 23, 2025Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 3 years ago
- This repository enables inference and sampling for Dyno Psi-1, a de novo miniprotein binder design model.☆25Aug 25, 2026Updated 2 months ago
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated 2 years ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Jul 25, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆24Aug 6, 2026Updated 2 months ago
- All-Atom (Including Hydrogen!) Ligand-Conditioned Protein Sequence Design & Sidechain Packing GNN☆95Sep 4, 2026Updated last month
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆194Oct 7, 2025Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆90Jul 2, 2025Updated last year
- ☆111Oct 21, 2026Updated last week
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated 2 years ago
- symdesign source☆11Jul 4, 2024Updated 2 years ago
- Virus Protein Structural Analysis Toolkit☆15Sep 9, 2024Updated 2 years ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆30Dec 21, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 8 months ago
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- ☆47Sep 16, 2024Updated 2 years ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆136Aug 3, 2025Updated last year
- ☆43Mar 30, 2025Updated last year
- Learning the language of protein-protein interactions☆157Jun 15, 2026Updated 4 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆65May 21, 2025Updated last year
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆90Apr 21, 2026Updated 6 months ago
- Conditionally Site-Independent Neural Evolution of Antibody Sequences (ICML '26)☆25Aug 30, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆19Dec 23, 2024Updated last year
- Deconvolving mutation effects on protein stability and function with disentangled protein language models☆19May 15, 2026Updated 5 months ago
- Fragment binding prediction with ColabFold☆47Oct 16, 2026Updated 2 weeks ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆106Jun 9, 2025Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆151Nov 11, 2025Updated 11 months ago
- ☆18Mar 13, 2024Updated 2 years ago
- LoRA for protein language models☆47Jan 24, 2024Updated 2 years ago