Alternatives and similar repositories for FoldToken_open:

Users that are interested in FoldToken_open are comparing it to the libraries listed below

• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆33Updated 6 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆32Updated 4 months ago
• HannesStark / CodonMPNN
  ☆27Updated 3 months ago
• petergroth / kermut
  This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …
  ☆18Updated 3 months ago
• BioinfoMachineLearning / ATOMRefine
  3D equivariant graph transformer for all-atom refinement of protein tertiary structures
  ☆25Updated last year
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆31Updated last year
• Junjie-Zhu / IDPFold
  IDPFold test version
  ☆19Updated 6 months ago
• ShenLab / SeqDance
  code for SeqDance, a biophysics-informed protein language model
  ☆22Updated 5 months ago
• PKUliujl / GeoSeqBuilder
  ☆25Updated last month
• compsciencelab / mdCATH
  This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…
  ☆40Updated 4 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆28Updated last week
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆30Updated 3 months ago
• petergroth / FLOP
  This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.
  ☆22Updated last year
• karma211225 / KarmaLoop
  Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop
  ☆11Updated 9 months ago
• jsunn-y / CARE
  CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes
  ☆31Updated last month
• kad-ecoli / mmCIF2BioLiP
  BioLiP2 database curation and web interface
  ☆23Updated last month
• pgmikhael / clipzyme
  Reaction-Conditioned Virtual Screening of Enzymes
  ☆29Updated 4 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆42Updated 3 months ago
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆33Updated 9 months ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆57Updated last year
• Gonglab-THU / GeoStab
  ☆30Updated 5 months ago
• JocelynSong / SurfPro
  ☆23Updated this week
• pengzhangzhi / Awesome-List-Protein-Binding-Site-Prediction-
  List of papers on protein binding site prediction
  ☆11Updated last year
• SigmaGenX / TamGen
  ☆30Updated 4 months ago
• tyang816 / VenusREM
  🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion.
  ☆38Updated 3 weeks ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆37Updated 3 months ago