Alternatives and similar repositories for RoseTTAFold2-PPI

Users that are interested in RoseTTAFold2-PPI are comparing it to the libraries listed below

• VarunUllanat / mint
  Learning the language of protein-protein interactions
  ☆98Updated last month
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆53Updated 2 months ago
• AbSciBio / igdesign
  ☆47Updated 9 months ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆59Updated 7 months ago
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆74Updated last month
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆66Updated 3 months ago
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆84Updated 4 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 7 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆70Updated this week
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆71Updated 4 months ago
• liuyf020419 / SCUBA-D
  ☆62Updated last year
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆84Updated last year
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated 11 months ago
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆35Updated 6 months ago
• Exscientia / abodybuilder3
  ☆68Updated last year
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆70Updated last year
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆64Updated last year
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆74Updated this week
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆82Updated last year
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆58Updated last month
• dina-lab3D / CombFold
  ☆87Updated last year
• gitter-lab / metl
  Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
  ☆55Updated last month
• Jfeldman34 / AF3Complex
  ☆47Updated 4 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆32Updated last year
• rigdenlab / ABCFold
  Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.
  ☆93Updated last month
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆31Updated last year
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆42Updated 5 months ago
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆58Updated 2 months ago
• yoakiyama / MSA_Pairformer
  ☆105Updated last week
• hefeda / PGP
  ☆42Updated last month