Alternatives and similar repositories for ProBID-NET:

Users that are interested in ProBID-NET are comparing it to the libraries listed below

• KosinskiLab / alphafold3x
  Explicit crosslinks in AlphaFold 3
  ☆14Updated last month
• PKUliujl / GeoSeqBuilder
  ☆24Updated this week
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆19Updated this week
• Ryan-Hu-Hu-Hu / GRACE
  GRACE: Generative Renaissance in Artificial Computational Enzyme Design
  ☆14Updated last week
• anirudhvenk / antibody-dpo
  ☆14Updated 2 weeks ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆30Updated 2 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆39Updated last month
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆29Updated last month
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆34Updated last month
• CSUBioGroup / DPFunc
  ☆17Updated this week
• skalyaanamoorthy / PSLMs
  ☆15Updated 2 months ago
• johnnytam100 / AlphaCutter
  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
  ☆15Updated last year
• ShenLab / SeqDance
  code for SeqDance, a biophysics-informed protein language model
  ☆20Updated 2 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆19Updated last year
• TencentAI4S / IgGM
  ☆33Updated this week
• JiangLab2020 / P450Diffusion
  P450Diffusion: A tool for designing P450 sequences based on diffusion model
  ☆21Updated 6 months ago
• davidekim / parametric_barrels
  ☆10Updated this week
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆29Updated this week
• danny305 / StabilityOracle
  ☆24Updated 6 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆44Updated 3 weeks ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆32Updated 4 months ago
• luwei0917 / AlphaFold3_PPI
  ☆14Updated 7 months ago
• liuyf020419 / SCUBA-D
  ☆51Updated 9 months ago
• Huatsing-Lau / PPB-Affinity-DataPrepWorkflow
  workflow used to prepare PPB-Affinity database
  ☆15Updated 4 months ago
• decodermu / GPD
  Graphormer Based Protein Sequence Design
  ☆24Updated 11 months ago
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆9Updated 4 years ago
• ibmm-unibe-ch / TemBERTure
  ☆22Updated 4 months ago
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆27Updated 5 months ago