Alternatives and similar repositories for ProBID-NET:

Users that are interested in ProBID-NET are comparing it to the libraries listed below

• anirudhvenk / antibody-dpo
  ☆15Updated last month
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆19Updated 5 years ago
• PKUliujl / GeoSeqBuilder
  ☆25Updated 2 weeks ago
• davidekim / parametric_barrels
  ☆11Updated last week
• Ryan-Hu-Hu-Hu / GRACE
  GRACE: Generative Renaissance in Artificial Computational Enzyme Design
  ☆14Updated last month
• KosinskiLab / alphafold3x
  Explicit crosslinks in AlphaFold 3
  ☆16Updated this week
• Huatsing-Lau / PPB-Affinity-DataPrepWorkflow
  workflow used to prepare PPB-Affinity database
  ☆15Updated 5 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆31Updated 3 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆24Updated last month
• skalyaanamoorthy / PSLMs
  ☆18Updated 3 months ago
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated this week
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆21Updated last year
• johnnytam100 / AlphaCutter
  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
  ☆15Updated last year
• ShenLab / SeqDance
  code for SeqDance, a biophysics-informed protein language model
  ☆22Updated 3 months ago
• danny305 / StabilityOracle
  ☆24Updated 7 months ago
• masoudk / AsiteDesign
  ☆13Updated last year
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆29Updated 2 months ago
• ld139 / ApoDock_public
  Code for ApoDock
  ☆18Updated last month
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆31Updated last year
• hongliangduan / HighFold
  ☆21Updated 9 months ago
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆27Updated 6 months ago
• liuyf020419 / SCUBA-D
  ☆52Updated 10 months ago
• ikalvet / heme_binder_design
  ☆9Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆41Updated 2 months ago
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆20Updated last year
• bene837 / af2seq
  ☆41Updated 5 months ago
• decodermu / GPD
  Graphormer Based Protein Sequence Design
  ☆24Updated last year
• Junjie-Zhu / IDPFold
  IDPFold test version
  ☆17Updated 5 months ago
• iamysk / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆40Updated this week