GMOD / GBrowse
the Generic Genome Browser
☆49Updated last year
Alternatives and similar repositories for GBrowse:
Users that are interested in GBrowse are comparing it to the libraries listed below
- Tools for querying and analysis of genomic data☆27Updated last month
- De novo transcriptome assembler for short reads☆62Updated 6 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- Maximum likelihood demultiplexing☆46Updated last year
- FALCON-Phase integrates PacBio long-read assemblies with Phase Genomics Hi-C data to create phased, diploid, chromosome-scale scaffolds☆74Updated 4 years ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆72Updated 7 months ago
- High-performance error correction for Illumina resequencing data☆69Updated 8 years ago
- *UNOFFICIAL, UNMAINTAINED and OUTDATED*: This was an unofficial archive of GMAP-GSNAP releases. Please use the original website for curr…☆32Updated 9 years ago
- A C++ header-only library for reading Oxford Nanopore Fast5 files☆53Updated 2 years ago
- Tools for analyzing 10X Genomics data☆42Updated 5 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆55Updated 7 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆65Updated 2 years ago
- small RNA analysis from NGS data☆37Updated 4 months ago
- Scripts, utilities and programs for genomic bioinformatics.☆81Updated last week
- Flexible circular visualization of genome-associated data with BioPerl and SVG.☆47Updated 5 years ago
- Utility programs to trim or sort Illumina reads with adapter sequences☆15Updated 11 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆65Updated 2 months ago
- Genome-wide reconstruction of complex structural variants☆39Updated 2 years ago
- Assembly Based ReAligner☆72Updated 6 years ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆69Updated 2 years ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆30Updated last year
- CoGe (Comparative Genomics) Platform☆44Updated 3 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆92Updated 8 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 4 years ago
- PacBio hybrid error correction through iterative short read consensus☆60Updated 5 years ago
- Merging, Annotation, Validation, and Illustration of Structural variants☆74Updated last year
- Error correction for Illumina RNA-seq reads☆64Updated 10 months ago
- Tools for bam file processing☆55Updated 9 years ago
- Linked-Read Alignment Tool☆27Updated 5 years ago