rothlab / chromozoomLinks
ChromoZoom is a fast, fluid web-based genome browser
☆48Updated 4 years ago
Alternatives and similar repositories for chromozoom
Users that are interested in chromozoom are comparing it to the libraries listed below
Sorting:
- Tools for bam file processing☆55Updated 10 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 8 years ago
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Updated 3 months ago
- A series of tools and pipelines for genotyping MHC / HLA genes and alleles using SMRT Sequencing☆22Updated 9 years ago
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 4 years ago
- Stupid Simple Structural Variant View☆25Updated 9 years ago
- A comprehensive pipeline to analyze and visualize structural variants☆20Updated 6 years ago
- Parse samtools pileup file to get how many bases and what kind of bases are called☆14Updated last year
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 6 years ago
- ☆28Updated 8 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆40Updated 2 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- The CHM1-NA12878 benchmark for single-sample SNP/INDEL calling from WGS Illumina data☆32Updated 7 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Updated last year
- simple library for dealing with SAM cigar strings☆41Updated 4 years ago
- Jitterbug is a bioinformatic software that predicts insertion sites of transposable elements in a sample sequenced by short paired-end re…☆17Updated 9 years ago
- Tools for generating and decoding error-correcting DNA barcodes☆15Updated 3 years ago
- full taxonomer cython repository☆22Updated 6 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 2 months ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- picking up low allelic-fraction, somatic variants from tumor samples☆14Updated 8 years ago
- ☆36Updated 5 years ago
- a string to graph aligner☆41Updated 9 years ago
- ☆25Updated 7 years ago
- conda recipes for genomic data☆84Updated 4 years ago
- GEMTools main repository☆17Updated 3 years ago
- Automated human exome/genome variants detection from FASTQ files☆23Updated 4 years ago
- Fast in-silico normalization algorithm for NGS data☆23Updated 4 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago