rpmccordlab / SMILELinks
SMILE: Mutual Information Learning for Integration of Single Cell Omics Data
☆11Updated 2 years ago
Alternatives and similar repositories for SMILE
Users that are interested in SMILE are comparing it to the libraries listed below
Sorting:
- ☆12Updated 4 years ago
- ☆10Updated 3 years ago
- ☆12Updated 4 years ago
- python API to the CoGAPS NMF package☆19Updated 3 months ago
- TRUST4 manuscript evaluation☆15Updated 3 years ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆12Updated 2 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Updated 2 years ago
- Perturb-seq analysis package☆14Updated last year
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Updated 2 years ago
- ☆16Updated 6 months ago
- Integrated Genome Modeling (IGM): multi-modal data-driven simulator of genome structures☆12Updated 2 years ago
- ☆12Updated 2 years ago
- Gene Expression Decomposition and Integration☆19Updated 6 months ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 3 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated 2 years ago
- ☆12Updated last year
- The million-scale method for single-cell analysis☆10Updated 2 years ago
- Breast Cancer Single Cell Atlas☆12Updated 3 years ago
- epigenome analysis to rank transcription factors☆13Updated 5 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- ☆17Updated 2 years ago
- Detecting cancer subtypes with machine learning.☆10Updated 5 years ago
- Code associated with MIX-seq manuscript☆15Updated 5 years ago
- ☆16Updated last year
- A collection of perl scripts for NGS analysis☆16Updated 11 months ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- Mean Alterations Using Discrete Expression☆14Updated last year
- ☆23Updated 3 years ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Updated 2 years ago
- Single-Cell Sequencing Quality Control and Processing Software☆16Updated 3 years ago