GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.
☆14Jun 13, 2023Updated 3 years ago
Alternatives and similar repositories for GIANT
Users that are interested in GIANT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Sep 30, 2024Updated last year
- ☆15Mar 15, 2023Updated 3 years ago
- Code for Universal Single-Cell Matching with Unpaired Feature Sets☆22Jun 7, 2021Updated 5 years ago
- A clustering algorithm that can perform internal validation inspired by forest fire dynamics and self-organized criticality☆18May 18, 2022Updated 4 years ago
- ☆19May 30, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Deep learning based prediction of IsoForm FUnctions from Sequences and Expression☆15Jul 28, 2025Updated last year
- Common Factor Integration & Transfer learning (cFIT) for single cell RNA-seq data☆13Jul 6, 2021Updated 5 years ago
- Trends in single cell papers☆17Sep 23, 2024Updated last year
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- Vector representations of gene co-expression in single cell RNAseq.☆36Jun 7, 2026Updated 2 months ago
- ☆13Sep 3, 2025Updated 11 months ago
- ☆29Sep 4, 2023Updated 2 years ago
- Genomic sequence preprocessing toolkit☆14Jul 27, 2026Updated 2 weeks ago
- R package for computing Association Plots☆17Nov 4, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A package for making MuE observation models in Edward2.☆13Jun 10, 2021Updated 5 years ago
- [Nature Communications] A foundation model for drug synergy analysis☆15Nov 17, 2025Updated 8 months ago
- Code for Predictive Network Representation Learning (SIGIR 2017)☆11Apr 24, 2020Updated 6 years ago
- ARCHIVED: this has been folded into the owlapi☆11Oct 27, 2020Updated 5 years ago
- ☆43Jun 11, 2022Updated 4 years ago
- Code, data and analysis for moslin.☆15Oct 7, 2024Updated last year
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 4 months ago
- Analysis code for the TAP-seq manuscript.☆11Jun 25, 2021Updated 5 years ago
- GENOT: Generative Neural Optimal Transport☆17Dec 18, 2024Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated last year
- mmCIF-based extension dictionary for computed structure models☆24Feb 5, 2026Updated 6 months ago
- 📝 [Tutorial] RepSeq data mining basics in R☆11Mar 13, 2019Updated 7 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Mar 7, 2025Updated last year
- Supplementary files and notebooks to recreate figures.☆23Aug 4, 2026Updated last week
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆34Nov 28, 2025Updated 8 months ago
- ☆48Apr 18, 2020Updated 6 years ago
- ☆40Aug 4, 2021Updated 5 years ago
- ☆40Jun 24, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Snakemake pipeline that works with the scIB package to benchmark data integration methods.☆83Jan 23, 2025Updated last year
- Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT)☆26Updated this week
- This package removes unwanted variation from raw sequencing count data using Negative Binomial and/or Zero Inflated Negative Binomial mod…☆18Jun 13, 2024Updated 2 years ago
- R package for transfer learning of single-cell RNA-seq denoising☆31Jun 14, 2022Updated 4 years ago
- SemI-SUpervised generative Autoencoder models for single cell data☆18Mar 30, 2021Updated 5 years ago
- ☆20Jun 12, 2026Updated 2 months ago
- Hierarchical classification of cells☆29Aug 2, 2024Updated 2 years ago