qiyunzhu / BeforePhyloLinks
Perl script for manipulating multiple sequence alignments for phylogenetic reconstruction
☆11Updated 11 years ago
Alternatives and similar repositories for BeforePhylo
Users that are interested in BeforePhylo are comparing it to the libraries listed below
Sorting:
- Code for computing various support scores for internodes☆19Updated 5 years ago
- Genome alignment and synteny plots☆33Updated 2 years ago
- R package to draw syntenic plots in 3 different styles☆42Updated 3 months ago
- Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.☆14Updated last year
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 6 years ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Updated last year
- ☆18Updated 5 years ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- ☆15Updated last year
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 5 years ago
- Alignment-Based Sequence extraction☆15Updated 3 years ago
- ☆33Updated 4 years ago
- ☆23Updated 3 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Updated 2 years ago
- Likelihood-based Selective Sweep Detection☆40Updated 2 years ago
- ☆42Updated 2 years ago
- ☆32Updated this week
- Gennome annotation scripts for the crickets Gryllus bimaculatus and Laupala kohalensis.☆13Updated 3 years ago
- Quartet Sampling method for phylogenetic branch support evaluation☆19Updated last year
- Multi-genome synteny block visualization tool☆50Updated last month
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 9 months ago
- DFOIL: Introgression Testing for Five Taxa☆33Updated 4 years ago
- STAG: Species Tree from All Genes☆34Updated 7 years ago
- Methods for finding associations between phenotypic and genomic differences between species using the Forward Genomics framework☆24Updated 3 years ago
- ☆22Updated 11 years ago
- Rapid, interactive, probabilistic analysis of convergent molecular evolution☆16Updated 7 years ago
- Scripts for population genetics analysis☆20Updated 3 years ago
- Haploidy and Size Completeness Estimation☆13Updated last year
- ☆32Updated 8 months ago
- ☆18Updated 2 years ago