naim-panjwani / LocusFocusLinks
Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)
☆10Updated this week
Alternatives and similar repositories for LocusFocus
Users that are interested in LocusFocus are comparing it to the libraries listed below
Sorting:
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Updated 6 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Updated 3 years ago
- ☆10Updated last year
- Fine-mapping with infinitesimal effects☆20Updated 8 months ago
- ☆21Updated last year
- An R package for creating ggplot2 based miami plots.☆18Updated 10 months ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Updated 5 months ago
- GWAS genetics Fine-mapping method☆26Updated last year
- Cross-population fine-mapping☆41Updated last year
- Create Regional Association Plots☆13Updated 4 months ago
- GWAS genetics Fine-mapping method☆16Updated last year
- SCALLOP-INF analysis☆20Updated 3 months ago
- A tool to plot significant regions of GWAS☆29Updated 3 years ago
- This is a pipeline for calculating weights for TWAS☆32Updated 3 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆27Updated last year
- ☆23Updated 3 weeks ago
- TWAS-pipeline☆24Updated 4 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆35Updated 5 years ago
- 🌓 Allele specific analyses across cell states and conditions☆10Updated 3 years ago
- A collection of modules to process and analyze IMGT-HLA sequences.☆28Updated 3 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Updated 3 months ago
- ☆15Updated 4 years ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Estimate genetic correlation using predicted expression☆23Updated 7 years ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated 2 years ago
- PredictDB Pipeline for GTEx v7 data☆18Updated 3 years ago
- Workflow for performing cistrome-wide associations studies☆11Updated 3 years ago
- Primo☆16Updated 4 years ago
- Stratified squared trans-ethnic genetic correlation☆14Updated 3 years ago
- Statistical fine-mapping pipeline in FinnGen☆31Updated 3 months ago