AlphaFold version that is extended to integrate diversity parameters for massive sampling.
☆18May 4, 2026Updated 6 months ago
Alternatives and similar repositories for AFmassive
Users that are interested in AFmassive are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆105Updated this week
- ☆12Jul 31, 2026Updated 3 months ago
- Paste a protein sequence, get an a3m. Borrows AlphaFold DB's precomputed MSAs instead of running a search.☆11Aug 8, 2026Updated 2 months ago
- Joint Protein-Ligand Embedding☆11Oct 3, 2025Updated last year
- ☆11Oct 7, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 3 years ago
- ☆15Sep 4, 2026Updated 2 months ago
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- Deep learning + physical modeling for 3D protein metal ion binding prediction☆14Feb 24, 2025Updated last year
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated 2 years ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- ☆15Mar 28, 2025Updated last year
- Fast deep learning methods for large-scale protein-protein interaction screening☆136Aug 3, 2025Updated last year
- Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold☆31Sep 13, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- bakerlab pymol scripts☆27Feb 6, 2020Updated 6 years ago
- All-atom generative protein design using SE(3) flow matching☆28Feb 3, 2026Updated 9 months ago
- Protein binding site prediction with transformers☆18Jul 7, 2026Updated 3 months ago
- Deconvolving mutation effects on protein stability and function with disentangled protein language models☆19May 15, 2026Updated 5 months ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆40Jul 25, 2024Updated 2 years ago
- HInt (Homologous Interactions)☆10Updated this week
- Feynman-Kac steering for controllable protein diffusion☆39Aug 16, 2026Updated 2 months ago
- ☆47Sep 16, 2024Updated 2 years ago
- Shrinking Proteins with Diffusion☆34Oct 12, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Structure-based antibody renumbering☆17Updated this week
- A command-line interface for MD-Repo service☆10Oct 6, 2026Updated 3 weeks ago
- Allosteric design of proteins using allosteric pathways, stability calculations, and normal mode analysis☆12Jan 11, 2026Updated 9 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆49May 22, 2025Updated last year
- ProCEDiS: a state-annotation-free framework to generate compact, diverse protein conformational ensembles via MSA recombination, AlphaFol…☆11Jul 29, 2026Updated 3 months ago
- ☆18Apr 3, 2026Updated 7 months ago
- Towards a protein binder candidate for every protein☆43Sep 1, 2026Updated 2 months ago
- ☆36Mar 2, 2026Updated 8 months ago
- protein deimmunization with a discrete diffusion model☆14Oct 11, 2026Updated 3 weeks ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Implementation of methods to sample from Boltzmann distributions☆22Jan 24, 2023Updated 3 years ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆65May 21, 2025Updated last year
- Efficient manipulation of protein structures in Python☆68Jun 16, 2026Updated 4 months ago
- ☆18Aug 28, 2023Updated 3 years ago
- An open-source neural network for performing accurate ML/MM MD simulation with electrostatic embedding.☆11May 28, 2025Updated last year
- Code repository for the SPOC tool for scoring binary AF-M predicitons.☆16Apr 27, 2025Updated last year
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆34Aug 23, 2024Updated 2 years ago