GBLille / AFmassiveLinks
AlphaFold version that is extended to integrate diversity parameters for massive sampling.
☆16Updated this week
Alternatives and similar repositories for AFmassive
Users that are interested in AFmassive are comparing it to the libraries listed below
Sorting:
- Generative diverse protein backbones by protein language model☆34Updated 3 months ago
- Modelling protein conformational landscape with Alphafold☆55Updated 5 months ago
- Deep generative modeling of protein structural ensembles☆36Updated 4 months ago
- DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.☆53Updated 6 months ago
- Structure prediction of alternative protein conformations☆80Updated 11 months ago
- Potts model-based protein sequence design☆80Updated 3 weeks ago
- ☆27Updated 2 years ago
- ☆54Updated 2 months ago
- ☆47Updated last year
- code for SeqDance/ESMDance, biophysics-informed protein language models☆53Updated 2 weeks ago
- ☆74Updated 10 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆61Updated 8 months ago
- Code for the paper "Learning to engineer protein flexibility".☆22Updated 3 weeks ago
- Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)☆47Updated this week
- Source code and examples for AlphaFold Unmasked☆76Updated 2 months ago
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆60Updated last week
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆43Updated last year
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆66Updated last month
- protein structure generation with sparse all-atom denoising models☆59Updated 2 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆47Updated 3 months ago
- ☆36Updated 2 months ago
- Structural Quality Assessment for Biomolecular Structure Prediction Models☆82Updated last week
- ☆21Updated last year
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆32Updated 3 weeks ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated last year
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆29Updated 2 years ago
- Code for deep learning guided design of dynamic proteins☆32Updated last year
- Implementation of Protein Invariant Point Packer (PIPPack)☆35Updated last year
- ☆47Updated 9 months ago
- A pipeline that used ML model based on Rosetta descriptors to predict the binding affinity of protein-protein complexes☆49Updated 3 months ago