☆42Jul 28, 2025Updated 10 months ago
Alternatives and similar repositories for BindingGYM
Users that are interested in BindingGYM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Protein representation and design under a single training scheme☆24May 17, 2026Updated 3 weeks ago
- AbBiBench (Antibody Binding Benchmarking), a benchmarking framework for optimizing antibody binding affinity.☆40May 14, 2026Updated 3 weeks ago
- Implementation of MapDiff: "Mask-prior-guided denoising diffusion improves inverse protein folding" in PyTorch☆47Jul 11, 2025Updated 11 months ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Scripts to run AlphaFold3, Boltz-2, Chai-1, OpenFold3, Protenix & RF3 with MMseqs2 MSAs and custom templates.☆108Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Extension of ThermoMPNN for double mutant predictions☆62Mar 23, 2026Updated 2 months ago
- Implementation of NeurIPS24 paper "Generalized Protein Pocket Generation with Prior-Informed Flow Matching"☆21May 15, 2025Updated last year
- Fitness landscapes for antibodies☆179May 12, 2026Updated last month
- The Family of Diffusion Protein Language Models (DPLM)☆336Jul 25, 2025Updated 10 months ago
- Code for humanization of antibody and nanobody☆85Aug 28, 2025Updated 9 months ago
- ☆113Jun 5, 2026Updated last week
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- ☆119Jan 3, 2026Updated 5 months ago
- Learning the language of protein-protein interactions☆150Apr 14, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Unleash MMseqs2’s power for your protein and nucleotide sequence analysis. Fast, simple, seamless!☆47Mar 13, 2026Updated 3 months ago
- Predicting mutational effects on protein binding from folding energy. ICML 2025.☆46Aug 4, 2025Updated 10 months ago
- ☆24Nov 28, 2025Updated 6 months ago
- Transfer learning for Mutation Effect Prediction☆17Feb 13, 2024Updated 2 years ago
- ☆41Jan 21, 2026Updated 4 months ago
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆44Aug 5, 2025Updated 10 months ago
- A generalized computational framework for biomolecular modeling.☆424Jun 5, 2026Updated last week
- workflow used to prepare PPB-Affinity database☆30Aug 22, 2024Updated last year
- 一个自建视频网站的工具，支持百度网盘作为数据后端☆12May 14, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A simple python package for doublet detection in scRNA-seq data☆11Mar 30, 2023Updated 3 years ago
- Efficient implementatin of ESM family.☆85Sep 9, 2025Updated 9 months ago
- Aligning protein generative models with experimental fitness☆121Mar 12, 2026Updated 3 months ago
- VenusFSFP: Few-Shot Protein Fitness Prediction☆116Nov 18, 2025Updated 6 months ago
- ☆31Dec 12, 2024Updated last year
- Code for RL-DIF☆16Jun 24, 2025Updated 11 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆52Dec 3, 2024Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆257Mar 26, 2026Updated 2 months ago
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆17May 4, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆61Oct 25, 2023Updated 2 years ago
- ☆10Mar 10, 2023Updated 3 years ago
- ☆43Jun 12, 2025Updated last year
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- Origin-1: a generative AI platform for de novo antibody design against novel epitopes☆79May 2, 2026Updated last month
- ☆132May 19, 2026Updated 3 weeks ago
- Generative Language Modeling for Antibody Design☆190Oct 5, 2024Updated last year