☆43Jul 28, 2025Updated last year
Alternatives and similar repositories for BindingGYM
Users that are interested in BindingGYM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AbBiBench (Antibody Binding Benchmarking), a benchmarking framework for optimizing antibody binding affinity.☆43May 14, 2026Updated 3 months ago
- Official repository for the ProteinGym benchmarks☆469Mar 25, 2026Updated 5 months ago
- ☆42Jan 21, 2026Updated 7 months ago
- IntelliFold: A Controllable Foundation Model for General and Specialized Biomolecular Structure Prediction.☆228Jun 23, 2026Updated 2 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆138Jan 28, 2026Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆126May 27, 2025Updated last year
- Learning the language of protein-protein interactions☆155Jun 15, 2026Updated 2 months ago
- Official repository for the Protriever paper☆17Jun 5, 2025Updated last year
- ☆118Jan 3, 2026Updated 8 months ago
- Implementation of MapDiff: "Mask-prior-guided denoising diffusion improves inverse protein folding" in PyTorch☆49Jul 11, 2025Updated last year
- ☆185Jul 24, 2026Updated last month
- Protein reasoning foundation models for drug discovery.☆69May 13, 2026Updated 3 months ago
- ☆118Jul 20, 2026Updated last month
- Extension of ThermoMPNN for double mutant predictions☆66Mar 23, 2026Updated 5 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Protein-Protein Language Model with Novel Attention Mechanisms for Enhanced Inter-Protein Contact and Interaction Prediction☆65Jul 18, 2026Updated last month
- Code for humanization of antibody and nanobody☆94Aug 28, 2025Updated last year
- Code for RL-DIF☆16Jun 24, 2025Updated last year
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆48Aug 5, 2025Updated last year
- Implementation of NeurIPS24 paper "Generalized Protein Pocket Generation with Prior-Informed Flow Matching"☆21May 15, 2025Updated last year
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆88Jul 23, 2026Updated last month
- open source code for Tencent tFold☆164Mar 14, 2025Updated last year
- ☆31Dec 12, 2024Updated last year
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Scripts to run AlphaFold3, Boltz-2, Chai-1, OpenFold3, Protenix & RF3 with MMseqs2 MSAs and custom templates.☆115Aug 18, 2026Updated 2 weeks ago
- Official Implementation of IgGM☆223May 28, 2026Updated 3 months ago
- ☆68Jul 15, 2026Updated last month
- Official repository of PXDesign☆254Dec 31, 2025Updated 8 months ago
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated last year
- ☆21Nov 21, 2025Updated 9 months ago
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆272Jul 24, 2025Updated last year
- A generalized computational framework for biomolecular modeling.☆444Aug 20, 2026Updated last week
- FoldBench is a low-homology benchmark spanning proteins, nucleic acids, ligands, and six major interaction types, enabling assessments th…☆149May 9, 2026Updated 3 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆46Aug 5, 2025Updated last year
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆282Apr 24, 2026Updated 4 months ago
- Biomolecular co-folding, binder filtering, and nanobody design☆90Jun 28, 2026Updated 2 months ago
- The Family of Diffusion Protein Language Models (DPLM)☆344Jul 25, 2025Updated last year
- [ICLR'26] Towards All-Atom Foundation Models for Biomolecular Binding Affinity Prediction☆23Jul 9, 2026Updated last month
- Protein representation and design under a single training scheme☆24May 17, 2026Updated 3 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆265Mar 26, 2026Updated 5 months ago