☆43Jul 28, 2025Updated last year
Alternatives and similar repositories for BindingGYM
Users that are interested in BindingGYM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AbBiBench (Antibody Binding Benchmarking), a benchmarking framework for optimizing antibody binding affinity.☆43May 14, 2026Updated 4 months ago
- Official repository for the ProteinGym benchmarks☆473Mar 25, 2026Updated 5 months ago
- ☆42Jan 21, 2026Updated 8 months ago
- IntelliFold: A Controllable Foundation Model for General and Specialized Biomolecular Structure Prediction.☆230Updated this week
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆143Jan 28, 2026Updated 7 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆126May 27, 2025Updated last year
- Learning the language of protein-protein interactions☆155Jun 15, 2026Updated 3 months ago
- Official repository for the Protriever paper☆17Jun 5, 2025Updated last year
- ☆118Jan 3, 2026Updated 8 months ago
- Implementation of MapDiff: "Mask-prior-guided denoising diffusion improves inverse protein folding" in PyTorch☆49Jul 11, 2025Updated last year
- ☆187Jul 24, 2026Updated last month
- Protein reasoning foundation models for drug discovery.☆70May 13, 2026Updated 4 months ago
- ☆120Jul 20, 2026Updated 2 months ago
- Extension of ThermoMPNN for double mutant predictions☆66Mar 23, 2026Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Code for humanization of antibody and nanobody☆96Aug 28, 2025Updated last year
- Code for RL-DIF☆16Jun 24, 2025Updated last year
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆48Aug 5, 2025Updated last year
- Protein-Protein Language Model with Novel Attention Mechanisms for Enhanced Inter-Protein Contact and Interaction Prediction☆68Jul 18, 2026Updated 2 months ago
- Implementation of NeurIPS24 paper "Generalized Protein Pocket Generation with Prior-Informed Flow Matching"☆21May 15, 2025Updated last year
- HalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structure…☆92Sep 10, 2026Updated last week
- open source code for Tencent tFold☆165Mar 14, 2025Updated last year
- ☆31Dec 12, 2024Updated last year
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Scripts to run AlphaFold3, Boltz-2, Chai-1, OpenFold3, Protenix & RF3 with MMseqs2 MSAs and custom templates.☆115Sep 3, 2026Updated 2 weeks ago
- Official Implementation of IgGM☆231May 28, 2026Updated 3 months ago
- Official repository of PXDesign☆263Dec 31, 2025Updated 8 months ago
- Official code release for Ambient Protein Diffusion☆35Aug 30, 2025Updated last year
- ☆69Jul 15, 2026Updated 2 months ago
- ☆21Nov 21, 2025Updated 10 months ago
- A generalized computational framework for biomolecular modeling.☆447Aug 20, 2026Updated last month
- Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…☆275Jul 24, 2025Updated last year
- FoldBench is a low-homology benchmark spanning proteins, nucleic acids, ligands, and six major interaction types, enabling assessments th…☆154May 9, 2026Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆46Aug 5, 2025Updated last year
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆292Apr 24, 2026Updated 4 months ago
- The Family of Diffusion Protein Language Models (DPLM)☆345Jul 25, 2025Updated last year
- Biomolecular co-folding, binder filtering, and nanobody design☆91Jun 28, 2026Updated 2 months ago
- [ICLR'26] Towards All-Atom Foundation Models for Biomolecular Binding Affinity Prediction☆23Jul 9, 2026Updated 2 months ago
- Protein representation and design under a single training scheme☆24May 17, 2026Updated 4 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆273Sep 9, 2026Updated 2 weeks ago