Alternatives and similar repositories for AuroBind

Users that are interested in AuroBind are comparing it to the libraries listed below

• WeiLab-Biology / DeepProSite
  ☆34Updated last year
• pgmikhael / clipzyme
  Reaction-Conditioned Virtual Screening of Enzymes
  ☆36Updated 2 months ago
• zhengkangjie / ESM-AA
  ☆76Updated 6 months ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆47Updated last year
• CataAI / PoseX
  PoseX: A Molecular Docking Benchmark
  ☆47Updated last month
• pengzhangzhi / ab_rmsd
  Calculate the RMSD between two antibody structure (including nanobody and antibody).
  ☆11Updated 2 years ago
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆43Updated 8 months ago
• ChenPy00 / PPB-Affinity
  Baseline model for PPB-Affinity benchmark data
  ☆27Updated 3 months ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated last year
• TianZhuAI4S / DiffAffinity
  Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)
  ☆37Updated last year
• ChemloverYuchen / BioScore
  ☆14Updated last month
• allanchen95 / ESMPair
  Bib'23: Improved the Heterodimer Protein Complex Prediction with Protein Language Models
  ☆15Updated last year
• Huatsing-Lau / PPB-Affinity-DataPrepWorkflow
  workflow used to prepare PPB-Affinity database
  ☆27Updated last year
• wangxr0526 / EasIFA
  Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”
  ☆39Updated 5 months ago
• Mingchenchen / AF3Score
  A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation
  ☆70Updated 2 weeks ago
• jiaxianyan / DeltaDock
  ☆27Updated 10 months ago
• karma211225 / KarmaLoop
  Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop
  ☆14Updated last year
• bzho3923 / ProtLGN
  ☆31Updated last year
• tiantz17 / PocketAnchor
  Learning Structure-based Pocket Representations for Protein-Ligand Interaction Prediction
  ☆34Updated 2 years ago
• bzho3923 / CPDiffusion
  ☆24Updated 10 months ago
• HBioquant / DiffBindFR
  Diffusion model based protein-ligand flexible docking method
  ☆110Updated 10 months ago
• xichengeva / DeepGlycanSite
  ☆32Updated last year
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆34Updated last week
• zjujdj / IGN
  InteractionGraphNet: a Novel and Efficient Deep Graph Representation Learning Framework for Accurate Protein-Ligand Interaction Predictio…
  ☆32Updated 4 years ago
• Eikor / InstructPLM
  The first large protein language model trained follows structure instructions.
  ☆84Updated 3 months ago
• jiaxianyan / BioMiner
  A Multi-modal System for Automated Mining of Protein-Ligand Bioactivity Data from Literature
  ☆54Updated last month
• sarisabban / RMSD
  Calculate the RMSD between two protein structures
  ☆12Updated 3 years ago
• luost26 / RDE-PPI
  Rotamer Density Estimator is an Unsupervised Learner of the Effect of Mutations on Protein-Protein Interaction (ICLR 2023)
  ☆59Updated last year
• BioinfoMachineLearning / ATOMRefine
  3D equivariant graph transformer for all-atom refinement of protein tertiary structures
  ☆26Updated 2 years ago
• WillHua127 / ReactZyme
  Official repository of ReactZyme
  ☆36Updated 10 months ago