STARLING - conSTruction of intrinsicAlly disoRdered proteins ensembles efficientLy vIa multi-dimeNsional Generative models
☆64Apr 15, 2026Updated last month
Alternatives and similar repositories for starling
Users that are interested in starling are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- bakerlab pymol scripts☆26Feb 6, 2020Updated 6 years ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- A framework for training energy-based diffusion models for sampling and energy estimation.☆97May 10, 2026Updated last week
- NeuralMD for Protein-ligand Binding Simulation, Nature Communicaitons 2025 https://www.nature.com/articles/s41467-025-67808-z☆48Nov 4, 2025Updated 6 months ago
- ☆10Oct 31, 2025Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 2 months ago
- ☆24Apr 10, 2026Updated last month
- ☆30Aug 27, 2025Updated 8 months ago
- ☆15Apr 13, 2026Updated last month
- Implementation of methods to sample from Boltzmann distributions☆22Jan 24, 2023Updated 3 years ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆59Jan 28, 2026Updated 3 months ago
- Disordered protein ensemble prediction☆14Apr 2, 2026Updated last month
- Predicting mutational effects on protein binding from folding energy. ICML 2025.☆44Aug 4, 2025Updated 9 months ago
- A thin wrapper around ProteinMPNN for convenient sampling without having to write out or consume files☆13Apr 29, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆13Apr 16, 2026Updated last month
- ☆28Apr 30, 2026Updated 3 weeks ago
- DualBind is a 3D structure-based deep learning model with a dual-loss framework for accurate and fast protein-ligand binding affinity pre…☆20Oct 21, 2025Updated 7 months ago
- ☆18Aug 28, 2023Updated 2 years ago
- ☆39Jun 17, 2025Updated 11 months ago
- Apo2Mol: 3D Molecule Generation via Dynamic Pocket-Aware Diffusion Models☆32May 12, 2026Updated last week
- Official implementation for our paper: Repurposing AlphaFold3-like Protein Folding Models for Antibody Sequence and Structure Co-design☆46Jan 8, 2026Updated 4 months ago
- [NeurIPS 2024] The implementation for the paper "Geometric Trajectory Diffusion Models".☆37Jul 22, 2025Updated 9 months ago
- protein structure generation with sparse all-atom denoising models☆62Apr 23, 2026Updated 3 weeks ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆46May 22, 2025Updated 11 months ago
- Deep generative modeling of protein structural ensembles☆37Apr 20, 2026Updated last month
- Benchmarking code accompanying the release of `bioemu`☆60Apr 24, 2026Updated 3 weeks ago
- ☆16Dec 10, 2024Updated last year
- Learning the language of protein-protein interactions☆148Apr 14, 2026Updated last month
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆59Dec 16, 2025Updated 5 months ago
- a universal molecular interaction modeling platform based on AlphaFold3, supporting structure prediction and analysis for various recepto…☆49Nov 20, 2025Updated 6 months ago
- 🎈 Structure-aware adapter fine-tuning PLMs, with high training speed and impressive performance (Journal of Chemical Information and Mod…☆26May 16, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Fast indexing and search of discontinuous motifs in protein structures☆143Apr 23, 2026Updated 3 weeks ago
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Jul 25, 2024Updated last year
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆234Jan 3, 2026Updated 4 months ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- Timewarp is a research project using deep learning to accelerate molecular dynamics simulation.☆60Aug 21, 2024Updated last year
- Tutorial files☆12Aug 7, 2024Updated last year