Disordered protein ensemble prediction
☆16Jun 11, 2026Updated last month
Alternatives and similar repositories for IDPForge
Users that are interested in IDPForge are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space☆34Jun 22, 2026Updated 3 weeks ago
- PeptoneBench: evaluating protein ensembles across the order-disorder continuum☆22Mar 24, 2026Updated 3 months ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- UCBShift is a program for predicting chemical shifts for backbone atoms and β-carbon of a protein in solution. It utilizes a machine lear…☆27Apr 9, 2026Updated 3 months ago
- ☆15Oct 28, 2025Updated 8 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Building more accurate protein structures from backbone torsion angles☆15Mar 21, 2025Updated last year
- ☆48Mar 7, 2026Updated 4 months ago
- Next generation sequence parameter library for proteins☆41Jun 9, 2026Updated last month
- Generate intrinsically disordered peptide conformations via machine learning☆25May 26, 2024Updated 2 years ago
- Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold☆28Sep 13, 2024Updated last year
- ELViM is a method for visualizing the energy landscapes of biomolecules simulations.☆16Aug 18, 2025Updated 11 months ago
- A Deep Learning Framework for Allosteric Site Prediction☆17May 21, 2025Updated last year
- ☆20Nov 24, 2025Updated 7 months ago
- An interpretable machine learning algorithm to predict disordered protein phase separation based on biophysical interactions☆14Apr 10, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- STARLING - conSTruction of intrinsicAlly disoRdered proteins ensembles efficientLy vIa multi-dimeNsional Generative models☆72Updated this week
- code for SeqDance/ESMDance, biophysics-informed protein language models☆60Jan 28, 2026Updated 5 months ago
- ☆15Sep 14, 2021Updated 4 years ago
- ☆15Mar 5, 2026Updated 4 months ago
- ☆12Sep 17, 2024Updated last year
- A framework for training energy-based diffusion models for sampling and energy estimation.☆105May 10, 2026Updated 2 months ago
- Official repository for IDiom☆16Jun 29, 2026Updated 3 weeks ago
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆17May 4, 2026Updated 2 months ago
- Deep generative modeling of protein structural ensembles☆39May 27, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A python package for generating disordered sequences and disorder sequence variants.☆18Jun 2, 2026Updated last month
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆16Apr 16, 2025Updated last year
- Iterative masking algorithm on MSA Transformer to generate synthetic sequences☆30Jan 17, 2024Updated 2 years ago
- This is the official implementation of the paper "A Deep Learning Approach for Rational Ligand Generation with Property Control via React…☆20Sep 28, 2024Updated last year
- DynamicGT: a dynamic-aware geometric transformer model to predict protein binding interfaces in flexible and disordered regions☆16Jun 18, 2026Updated last month
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆82May 1, 2026Updated 2 months ago
- Implementation of Particle Guidance: non-I.I.D. Diverse Sampling with Diffusion Models☆78Oct 23, 2023Updated 2 years ago
- Deconvolving mutation effects on protein stability and function with disentangled protein language models☆18May 15, 2026Updated 2 months ago
- EnsembleFlex - Flexibility Analysis of Structure Ensembles☆19Sep 10, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- FINCHES (First-principle Interactions via CHEmical Specificity) - Python package for predicting chemically-specific molecular interaction…☆49May 20, 2026Updated 2 months ago
- A unified cross-attention model for predicting antigen binding specificity to both HLA and TCR molecules☆15May 29, 2026Updated last month
- DeePhase predictor of homotypic liquid-liquid phase separation of proteins & the code associated with the paper "Learning the molecular g…☆20Dec 30, 2021Updated 4 years ago
- Timewarp is a research project using deep learning to accelerate molecular dynamics simulation.☆66Aug 21, 2024Updated last year
- Benchmarking code accompanying the release of `bioemu`☆64Jul 8, 2026Updated last week
- ☆15Jun 3, 2025Updated last year
- Software for the prediction of DEER and PRE data from conformational ensembles.☆14May 6, 2025Updated last year