Graylab / AlphaREDLinks
AlphaFold-initiated replica exchange protein docking
☆84Updated 3 months ago
Alternatives and similar repositories for AlphaRED
Users that are interested in AlphaRED are comparing it to the libraries listed below
Sorting:
- ☆87Updated last month
- code for IDR binding paper 2025☆51Updated 7 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆65Updated 2 months ago
- ☆52Updated last month
- ☆45Updated 8 months ago
- Efficient manipulation of protein structures in Python☆56Updated last week
- ☆44Updated 2 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆65Updated 9 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- ☆86Updated 11 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆96Updated 5 months ago
- Learning the language of protein-protein interactions☆92Updated 3 weeks ago
- Analysis of alphafold and colabfold results☆31Updated 2 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆69Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆65Updated 2 months ago
- Protein Structure Analysis☆55Updated 2 months ago
- Source code and examples for AlphaFold Unmasked☆73Updated 3 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆91Updated this week
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆88Updated 3 weeks ago
- ☆71Updated 5 months ago
- ☆61Updated last year
- Kuhlman Lab Installation of AlphaFold3☆30Updated this week
- ☆75Updated 7 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆96Updated 2 years ago
- Toolkit for alphafold3 input and output files☆83Updated last month
- AlphaBind code + model accompanying pre-print☆77Updated last month
- BindCraft v1.52 modified to make PyRosetta use and installation optional☆65Updated last week
- ☆44Updated last year
- Protein folding in Pymol☆109Updated 8 months ago