Graylab / AlphaRED
AlphaFold-initiated replica exchange protein docking
☆72Updated last week
Alternatives and similar repositories for AlphaRED:
Users that are interested in AlphaRED are comparing it to the libraries listed below
- ☆74Updated last week
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆51Updated last month
- ☆114Updated 5 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆51Updated last month
- ☆80Updated 5 months ago
- ☆56Updated 11 months ago
- ☆110Updated last week
- ☆49Updated 9 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆149Updated 3 weeks ago
- Efficient manipulation of protein structures in Python☆52Updated 4 months ago
- ☆43Updated 6 months ago
- Official repository of GENzyme☆45Updated 3 months ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆103Updated this week
- ☆88Updated 4 months ago
- A bunch of shell utilities for dealing the silent files☆56Updated 2 weeks ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆35Updated 2 years ago
- AlphaBind code + model accompanying pre-print☆48Updated 3 months ago
- Improved antibody structure-based design using inverse folding☆99Updated last week
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆27Updated 9 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆65Updated 6 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆67Updated 4 months ago
- ☆49Updated this week
- ☆104Updated 2 years ago
- Code for ColabDock paper☆137Updated 5 months ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆152Updated last month
- Code for humanization of antibody and nanobody☆37Updated 3 months ago
- ☆100Updated 2 years ago
- ☆63Updated last month
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆88Updated 7 months ago