☆15Mar 28, 2025Updated last year
Alternatives and similar repositories for probabilities_design
Users that are interested in probabilities_design are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 8 months ago
- Code for deep learning guided design of dynamic proteins☆34Jul 16, 2024Updated 2 years ago
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- Feynman-Kac steering for controllable protein diffusion☆37Updated this week
- Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.☆12Dec 10, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- protein backbone refinement☆15Sep 12, 2024Updated last year
- ☆24May 19, 2025Updated last year
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆72Aug 4, 2026Updated last week
- ☆13May 24, 2026Updated 2 months ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆16Sep 10, 2024Updated last year
- Metrics for our protein design competitions.☆36Nov 1, 2024Updated last year
- Code base for "Evaluation of Machine Learning-Assisted Directed Evolution Across Diverse Combinatorial Landscapes"☆15Jun 19, 2025Updated last year
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- ☆18Oct 5, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆17Mar 26, 2024Updated 2 years ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated 2 years ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆177Jun 25, 2026Updated last month
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆122Updated this week
- Some scoring functions for predicting the effects of mutations on protein sequences using ESM-2☆12Dec 10, 2023Updated 2 years ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- Protein stability prediction using rewired protein generative models☆90Jul 15, 2026Updated 3 weeks ago
- ☆10Apr 1, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A standardized protein design benchmark for motif-scaffolding problems☆84Updated this week
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆48Aug 5, 2025Updated last year
- Code for our paper "Protein sequence design with a learned potential"☆34Aug 5, 2021Updated 5 years ago
- Codebase for our preprint using trRosetta to design proteins with discontinuous functional sites, found here: https://www.biorxiv.org/con…☆16Oct 27, 2021Updated 4 years ago
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 2 years ago
- Expert-Guided Protein Language Models enable Accurate and Blazingly Fast Fitness Prediction☆17Feb 6, 2026Updated 6 months ago
- ☆55Apr 22, 2026Updated 3 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆133Aug 3, 2025Updated last year
- Fast protein structure searching or your money back☆119Apr 13, 2026Updated 3 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- NeurIPS 2023 Spotlight paper: Full atom protein pocket design via iterative refinement☆49Oct 28, 2023Updated 2 years ago
- Metrics to evaluate distributional coverage of generative models of protein structures.☆21Aug 13, 2025Updated 11 months ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆33Dec 14, 2023Updated 2 years ago
- mirror of https://zhanglab.ccmb.med.umich.edu/EDTSurf/☆10Jun 20, 2023Updated 3 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆13Jul 9, 2025Updated last year
- Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks☆10Jun 13, 2022Updated 4 years ago
- List of computational protein design research labs☆243Feb 9, 2025Updated last year