bakerlab pymol scripts
☆27Feb 6, 2020Updated 6 years ago
Alternatives and similar repositories for pymol_scripts
Users that are interested in pymol_scripts are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 4 months ago
- STARLING - conSTruction of intrinsicAlly disoRdered proteins ensembles efficientLy vIa multi-dimeNsional Generative models☆69Jun 4, 2026Updated 3 weeks ago
- Demos of many Rosetta applications☆25Jun 10, 2025Updated last year
- ☆82May 6, 2026Updated last month
- ☆16Dec 10, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Rosetta FunFolDes – a general framework for the computational design of functional proteins.☆20Apr 12, 2019Updated 7 years ago
- A convinent tool to visualize AlphaFold 3 prediction results with PyMOL and matplotlib☆19May 20, 2024Updated 2 years ago
- Implementation of methods to sample from Boltzmann distributions☆22Jan 24, 2023Updated 3 years ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆104Jun 9, 2025Updated last year
- ☆15Jun 3, 2025Updated last year
- Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold☆27Sep 13, 2024Updated last year
- Display PackedPose objects, Pose objects, or PDB files within a Jupyter notebook and Google Colab☆11Oct 16, 2022Updated 3 years ago
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆11Aug 29, 2020Updated 5 years ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Reaction-Conditioned Virtual Screening of Enzymes☆45Jun 13, 2026Updated 2 weeks ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆142Nov 11, 2025Updated 7 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆112Apr 15, 2026Updated 2 months ago
- Homomer symmetry prediction from protein sequence☆45Mar 13, 2025Updated last year
- ☆40Jun 17, 2025Updated last year
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆12Jan 7, 2026Updated 5 months ago
- ☆22Dec 20, 2024Updated last year
- ☆12May 3, 2025Updated last year
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code supporting the Protein Design Archive (PDA) database publication☆16May 6, 2026Updated last month
- Protein representation and design under a single training scheme☆24May 17, 2026Updated last month
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆48Aug 5, 2025Updated 10 months ago
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆17May 4, 2026Updated last month
- ☆33Mar 2, 2026Updated 4 months ago
- ☆18Mar 13, 2024Updated 2 years ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆31Aug 9, 2024Updated last year
- protein docking stuff☆52Apr 2, 2026Updated 3 months ago
- Predicting mutational effects on protein binding from folding energy. ICML 2025.☆46Aug 4, 2025Updated 10 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Official repository of GENzyme☆64Nov 29, 2024Updated last year
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆34Aug 23, 2024Updated last year
- Official repository of EnzymeFlow☆102Dec 7, 2024Updated last year
- The OpenMM Cookbook and Tutorials☆58Apr 28, 2026Updated 2 months ago
- ☆27Feb 10, 2024Updated 2 years ago
- Identifying peptide-receptor interactions using AlphaFold-Multimer☆28Sep 12, 2023Updated 2 years ago
- ☆98Jun 24, 2026Updated last week