Alternatives and similar repositories for pymol_scripts

Users that are interested in pymol_scripts are comparing it to the libraries listed below

• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆26Updated 3 weeks ago
• davidekim / parametric_barrels
  ☆13Updated 4 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆22Updated last year
• ComputArtCMCG / ProBID-NET
  ☆14Updated 3 weeks ago
• PKUliujl / GeoSeqBuilder
  ☆27Updated 4 months ago
• Ryan-Hu-Hu-Hu / GRACE
  GRACE: Generative Renaissance in Artificial Computational Enzyme Design
  ☆18Updated 5 months ago
• Furman-Lab / PatchMAN
  ☆26Updated last month
• meilerlab / probabilities_design
  ☆13Updated 2 months ago
• ikalvet / invrotzyme
  Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.
  ☆21Updated 3 months ago
• anirudhvenk / antibody-dpo
  ☆22Updated last month
• bzho3923 / CPDiffusion
  ☆23Updated 8 months ago
• johnnytam100 / AlphaCutter
  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
  ☆15Updated last year
• CarbonMatrixLab / carbonnovo
  Official open-source of CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model
  ☆23Updated 7 months ago
• ZhuofanShen / Rosetta-Enzyme-Design-Pipeline
  ☆9Updated last month
• RosettaCommons / demos
  Demos of many Rosetta applications
  ☆17Updated 2 weeks ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆26Updated last month
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆33Updated 3 months ago
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated 4 months ago
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆23Updated last year
• KosinskiLab / alphafold3x
  Explicit crosslinks in AlphaFold 3
  ☆22Updated 3 months ago
• Wublab / pythia_ppi
  PPI version of Pythia
  ☆11Updated 7 months ago
• KexinZhangResearch / PhysDock
  Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction
  ☆59Updated 2 months ago
• Zuricho / AlphaFold3_Result_Visualize
  A convinent tool to visualize AlphaFold 3 prediction results with PyMOL and matplotlib
  ☆17Updated last year
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆35Updated 10 months ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated 5 months ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆30Updated 11 months ago
• meneshail / TopoDiff
  Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"
  ☆19Updated last month
• masoudk / AsiteDesign
  ☆13Updated last year
• sokrypton / roscon2024
  Tutorial files
  ☆11Updated 10 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆33Updated 7 months ago