luwei0917 / AlphaFold3_PPI
☆14Updated 10 months ago
Alternatives and similar repositories for AlphaFold3_PPI:
Users that are interested in AlphaFold3_PPI are comparing it to the libraries listed below
- ☆26Updated 8 months ago
- ☆26Updated 2 months ago
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆11Updated 11 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆31Updated 8 months ago
- Extension of ThermoMPNN for double mutant predictions☆32Updated last month
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆22Updated last year
- workflow used to prepare PPB-Affinity database☆17Updated 7 months ago
- Computationally Restoring the Potency of a Clinical Antibody☆17Updated last year
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆32Updated last week
- ☆23Updated 6 months ago
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆12Updated 3 weeks ago
- scripts to find PBD structures for cancer driver proteins☆31Updated last month
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆32Updated 5 months ago
- ☆30Updated 8 months ago
- ☆18Updated 5 months ago
- DyNoPy☆11Updated 7 months ago
- ☆13Updated last year
- ☆14Updated 6 months ago
- Homomer symmetry prediction from protein sequence☆22Updated last month
- ☆31Updated last year
- Making Protein folding accessible to all!☆22Updated last year
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆22Updated 9 months ago
- ☆34Updated 6 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆28Updated 10 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆24Updated last week
- Structure-Informed Protein Language Model☆31Updated last year
- Scoring methods for predicting the DDG upon protein mutation☆14Updated 2 years ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆16Updated 3 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆16Updated 3 years ago