☆15May 29, 2024Updated 2 years ago
Alternatives and similar repositories for AlphaFold3_PPI
Users that are interested in AlphaFold3_PPI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆24Oct 31, 2025Updated last year
- ☆17Jun 3, 2025Updated last year
- few-shot compound activity regression☆12Aug 19, 2024Updated 2 years ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆17May 2, 2021Updated 5 years ago
- Pharmacophore Elucidation with Convolutional Neural Networks and Reinforcement Learning☆17Apr 7, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A python package and collection of scripts for computing protein surface meshes, chemical, electrostatic, geometric features, and buildin…☆28Jul 15, 2025Updated last year
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Sep 18, 2023Updated 3 years ago
- ☆13Mar 2, 2026Updated 8 months ago
- ☆119Jan 3, 2026Updated 10 months ago
- ☆31Aug 12, 2024Updated 2 years ago
- ☆12May 16, 2020Updated 6 years ago
- ☆13May 24, 2026Updated 5 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆135Oct 24, 2025Updated last year
- Epitope Prediction Pipeline and analysis tools built around AlphaFold 2☆21May 9, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆12Mar 18, 2024Updated 2 years ago
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆19Apr 16, 2025Updated last year
- ☆14May 18, 2025Updated last year
- Multi platform molecular dynamics simulator for coarse-grained MD simulation on GPU.☆15Oct 2, 2026Updated last month
- Ligand force matching☆12Dec 4, 2025Updated 10 months ago
- ☆14Mar 15, 2025Updated last year
- Segmentation of nucleic acid binding interface on protein surface with geometric deep learning☆15May 3, 2023Updated 3 years ago
- ☆12Oct 9, 2024Updated 2 years ago
- Application of deep generative model discovers novel and diverse functional peptides against microbial resistance☆11Dec 22, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- rid☆26Aug 15, 2021Updated 5 years ago
- Python rich client for visual protein Sequence to Structure Analysis☆22Mar 31, 2026Updated 7 months ago
- Official Implementation of CompassDock☆21Feb 13, 2026Updated 8 months ago
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆18May 4, 2026Updated 5 months ago
- Distribution package for BaNDyT: Bayesian Network Analysis of Dynamic Trajectories☆11Mar 30, 2026Updated 7 months ago
- Cyclic peptide binder design using a fragment docking and assembling strategy☆12May 20, 2025Updated last year
- Open source code for PepBFN.☆13Mar 4, 2026Updated 7 months ago
- Design scripts corresponding to "Computational design of sequence-specific DNA-binding proteins."☆23Oct 23, 2025Updated last year
- This repository implements Gibbs sampling with Graph-based Smoothing☆42May 29, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- 2D Protein-Ligand Interaction Generator with PLIP output☆10Sep 7, 2025Updated last year
- Deep Residual Learning for Molecular Force Fields☆13Aug 12, 2026Updated 2 months ago
- wwPDB PDBx/mmCIF Dictionary☆10Oct 27, 2026Updated last week
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆112May 25, 2025Updated last year
- Rank binders by structure modeling☆17Apr 10, 2026Updated 6 months ago
- ☆12Jun 16, 2023Updated 3 years ago
- Repository of computational biochemistry protocols for the Amber package☆12Oct 4, 2024Updated 2 years ago