Alternatives and similar repositories for AlphaFold3_PPI:

Users that are interested in AlphaFold3_PPI are comparing it to the libraries listed below

• Furman-Lab / PatchMAN
  ☆25Updated 6 months ago
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated this week
• Ryan-Hu-Hu-Hu / GRACE
  GRACE: Generative Renaissance in Artificial Computational Enzyme Design
  ☆14Updated last month
• LLNL / CRPCA
  Computationally Restoring the Potency of a Clinical Antibody
  ☆17Updated 11 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆24Updated last month
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆20Updated last year
• alepandini / DyNoPy
  DyNoPy
  ☆11Updated 5 months ago
• PKUliujl / GeoSeqBuilder
  ☆25Updated 2 weeks ago
• WeiLab-Biology / DeepProSite
  ☆31Updated last year
• skalyaanamoorthy / PSLMs
  ☆18Updated 3 months ago
• ComputArtCMCG / ProBID-NET
  ☆14Updated 4 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆26Updated 10 months ago
• jkwang93 / AMP-Designer
  A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery
  ☆11Updated 3 months ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 7 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆21Updated last year
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆27Updated 6 months ago
• Zhang-Runze / PackDock
  PackDock: a Diffusion Based Side Chain Packing Model for Flexible Protein-Ligand Docking
  ☆31Updated 4 months ago
• bzho3923 / CPDiffusion
  ☆20Updated 4 months ago
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆31Updated 3 months ago
• bzho3923 / ProtLGN
  ☆28Updated 6 months ago
• anirudhvenk / antibody-dpo
  ☆15Updated last month
• protddg-bench / protddg-bench
  Scoring methods for predicting the DDG upon protein mutation
  ☆13Updated 2 years ago
• ohuelab / Solubility_AfDesign
  Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol
  ☆31Updated last year
• CSUBioGroup / DPFunc
  ☆21Updated last month
• Gonglab-THU / GeoStab
  ☆30Updated 3 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆31Updated last year
• wangxr0526 / EasIFA
  Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”
  ☆25Updated last week
• psalveso / pyRIF
  Using Rotamer Interaction Fields from RIFGen/Dock in python
  ☆16Updated 3 years ago
• masoudk / AsiteDesign
  ☆13Updated last year
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆19Updated 5 years ago