☆15May 29, 2024Updated last year
Alternatives and similar repositories for AlphaFold3_PPI
Users that are interested in AlphaFold3_PPI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆22Oct 31, 2025Updated 5 months ago
- ☆15Jun 3, 2025Updated 10 months ago
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆16Apr 16, 2025Updated 11 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆124Oct 24, 2025Updated 5 months ago
- A python package and collection of scripts for computing protein surface meshes, chemical, electrostatic, geometric features, and buildin…☆27Jul 15, 2025Updated 9 months ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Sep 18, 2023Updated 2 years ago
- ☆13Dec 5, 2024Updated last year
- ☆117Jan 3, 2026Updated 3 months ago
- ☆11May 16, 2020Updated 5 years ago
- Pharmacophore Elucidation with Convolutional Neural Networks and Reinforcement Learning☆17Apr 7, 2025Updated last year
- ☆33Aug 12, 2024Updated last year
- rid☆25Aug 15, 2021Updated 4 years ago
- Epitope Prediction Pipeline and analysis tools built around AlphaFold 2☆20May 9, 2024Updated last year
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆17Mar 18, 2026Updated 3 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Geometry-aware protein binding site predictor☆25Aug 29, 2024Updated last year
- Code of "Instruction Multi-Constraint Molecular Generation Using a Teacher-Student Large Language Model"☆14Jul 8, 2025Updated 9 months ago
- Disordered protein ensemble prediction☆14Apr 2, 2026Updated last week
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated 11 months ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆103May 25, 2025Updated 10 months ago
- Segmentation of nucleic acid binding interface on protein surface with geometric deep learning☆14May 3, 2023Updated 2 years ago
- init commit☆15Oct 31, 2023Updated 2 years ago
- Application of deep generative model discovers novel and diverse functional peptides against microbial resistance☆11Dec 22, 2022Updated 3 years ago
- ☆12Oct 9, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Synthetic Accessibility via Fragment Assembly Generation☆23Updated this week
- ☆13Apr 1, 2026Updated 2 weeks ago
- ☆33Mar 9, 2026Updated last month
- This repository implements Gibbs sampling with Graph-based Smoothing☆41May 29, 2024Updated last year
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆18May 2, 2021Updated 4 years ago
- PairMap: An Intermediate Insertion Approach for Improving the Accuracy of Relative Free Energy Perturbation Calculations for Distant Comp…☆16Mar 18, 2026Updated 3 weeks ago
- Multimodal encoder-only transformer model for image-based protein predictions☆15Dec 12, 2023Updated 2 years ago
- ☆20Aug 5, 2025Updated 8 months ago
- ☆13Feb 20, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆26Oct 8, 2024Updated last year
- ☆214Sep 24, 2024Updated last year
- Rank binders by structure modeling☆16Updated this week
- ☆12Jun 16, 2023Updated 2 years ago
- Free Parametrization for Small Molecules☆52Feb 18, 2026Updated last month
- PoseX: A Molecular Docking Benchmark☆73Mar 23, 2026Updated 3 weeks ago
- Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)☆11Jan 5, 2024Updated 2 years ago