Junjie-Zhu / IDPFold
IDPFold test version
☆19Updated 6 months ago
Alternatives and similar repositories for IDPFold:
Users that are interested in IDPFold are comparing it to the libraries listed below
- code for SeqDance, a biophysics-informed protein language model☆22Updated 5 months ago
- scripts to find PBD structures for cancer driver proteins☆31Updated last month
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆32Updated 4 months ago
- ☆34Updated 11 months ago
- Extension of ThermoMPNN for double mutant predictions☆28Updated last week
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆42Updated 3 months ago
- ☆31Updated last year
- bakerlab pymol scripts☆21Updated 5 years ago
- BioLiP2 database curation and web interface☆23Updated last month
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year
- PackDock: a Diffusion Based Side Chain Packing Model for Flexible Protein-Ligand Docking☆33Updated 5 months ago
- Graphormer Based Protein Sequence Design☆24Updated last year
- Convert coarse-grained protein structure to all-atom model☆37Updated 9 months ago
- Binding pocket optimization based on force fields and docking scoring functions☆30Updated this week
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆40Updated 4 months ago
- Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop☆11Updated 9 months ago
- ☆17Updated 2 months ago
- Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks☆11Updated 2 years ago
- ☆49Updated this week
- 3D equivariant graph transformer for all-atom refinement of protein tertiary structures☆25Updated last year
- Generate intrinsically disordered peptide conformations via machine learning☆19Updated 9 months ago
- Modelling protein conformational landscape with Alphafold☆45Updated last week
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆52Updated last year
- Generative diverse protein backbones by protein language model☆31Updated 3 months ago
- A variational autoencoder that directly generates the 3D coordinates of immunoglobulin protein backbones.☆27Updated 2 years ago