Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold
☆26Sep 13, 2024Updated last year
Alternatives and similar repositories for IDPFold
Users that are interested in IDPFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆47Mar 7, 2026Updated 3 weeks ago
- Generative diverse protein backbones by protein language model☆34Feb 27, 2026Updated last month
- ☆52Jan 2, 2025Updated last year
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆16Mar 18, 2026Updated last week
- bakerlab pymol scripts☆26Feb 6, 2020Updated 6 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Demos of many Rosetta applications☆24Jun 10, 2025Updated 9 months ago
- An open-source platform for developing protein models beyond AlphaFold.☆12Jul 15, 2025Updated 8 months ago
- Disordered protein ensemble prediction☆13Updated this week
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- ☆70Feb 13, 2026Updated last month
- ☆75Jan 23, 2026Updated 2 months ago
- Generate intrinsically disordered peptide conformations via machine learning☆26May 26, 2024Updated last year
- Generative Protein Emulator☆64Sep 25, 2025Updated 6 months ago
- Benchmarking code accompanying the release of `bioemu`☆56Nov 25, 2025Updated 4 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- ☆26Mar 13, 2026Updated 2 weeks ago
- ☆15Jun 26, 2018Updated 7 years ago
- Predicting mutational effects on protein binding from folding energy. ICML 2025.☆41Aug 4, 2025Updated 7 months ago
- Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space☆32Dec 18, 2025Updated 3 months ago
- A convinent tool to visualize AlphaFold 3 prediction results with PyMOL and matplotlib☆19May 20, 2024Updated last year
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆278Dec 10, 2024Updated last year
- Implementation of methods to sample from Boltzmann distributions☆21Jan 24, 2023Updated 3 years ago
- [NeurIPS 2024] The implementation for the paper "Geometric Trajectory Diffusion Models".☆35Jul 22, 2025Updated 8 months ago
- Geometric Algebra Flow Matching (GAFL) for Protein Backbone Generation☆18Oct 31, 2025Updated 4 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- A python implementation of pdb2oniom for QM/MM (ONIOM) calculations☆11Oct 2, 2025Updated 5 months ago
- Homomer symmetry prediction from protein sequence☆43Mar 13, 2025Updated last year
- Deep generative modeling of protein structural ensembles☆37Sep 22, 2025Updated 6 months ago
- Generative modeling of molecular dynamics trajectories☆205Mar 22, 2026Updated last week
- code for SeqDance/ESMDance, biophysics-informed protein language models☆56Jan 28, 2026Updated 2 months ago
- ☆42Apr 12, 2024Updated last year
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆519Mar 22, 2026Updated last week
- Reaction-Conditioned Virtual Screening of Enzymes☆42Jun 11, 2025Updated 9 months ago
- ☆15May 29, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆36Jun 17, 2025Updated 9 months ago
- a toolbox for the manipulation, modelling and analysis of molecular structures☆27Nov 27, 2025Updated 4 months ago
- The official code for "TaxDiff: Taxonomic-Guided Diffusion Model for Protein Sequence Generation"☆74Aug 23, 2024Updated last year
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- ☆17Oct 27, 2024Updated last year
- EigenFold: Generative Protein Structure Prediction with Diffusion Models☆180Apr 6, 2023Updated 2 years ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆81Mar 7, 2024Updated 2 years ago