Code supporting the Protein Design Archive (PDA) database publication
☆16Aug 12, 2026Updated 3 weeks ago
Alternatives and similar repositories for chronowska-stam-wood-2024-protein-design-archive
Users that are interested in chronowska-stam-wood-2024-protein-design-archive are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Source code for The Protein Design Archive web application.☆10Aug 12, 2026Updated 3 weeks ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 9 months ago
- ☆15Mar 28, 2025Updated last year
- bakerlab pymol scripts☆27Feb 6, 2020Updated 6 years ago
- ☆17Mar 26, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- An open-source project to visualize volumetric image series over multiple temporal axes and render animations of changing morphology.☆20Apr 25, 2026Updated 4 months ago
- A conditionally adapted protein language model for the generation of enzymes☆24Nov 26, 2024Updated last year
- Biomolecular co-folding, binder filtering, and nanobody design☆90Jun 28, 2026Updated 2 months ago
- Building a DCA Frustratometer from scratch. Ultimately we aim to compare frustrated sites according to the DCA and AWSEM Frustratometers.☆16Jan 8, 2026Updated 8 months ago
- SwitchCraft: A Programmatic Framework for Designing State-Switching Proteins☆89Jun 1, 2026Updated 3 months ago
- ☆20Feb 6, 2026Updated 7 months ago
- ☆21Nov 21, 2025Updated 9 months ago
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆48Aug 5, 2025Updated last year
- Fast protein structure searching or your money back☆119Apr 13, 2026Updated 4 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆24May 19, 2025Updated last year
- Foldy: a web-based platform for interactive protein structure analysis☆29Oct 28, 2025Updated 10 months ago
- Identifying peptide-receptor interactions using AlphaFold-Multimer☆29Sep 12, 2023Updated 2 years ago
- Design scripts corresponding to "Computational design of sequence-specific DNA-binding proteins."☆22Oct 23, 2025Updated 10 months ago
- This package makes it easier for you to draw beautiful ternary diagram without pymatgen.☆23Jun 29, 2026Updated 2 months ago
- The code for NeurIPS 2023 paper DSR☆14Oct 8, 2023Updated 2 years ago
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆17May 4, 2026Updated 4 months ago
- P450Diffusion: A tool for designing P450 sequences based on diffusion model☆27Apr 28, 2026Updated 4 months ago
- ☆64Sep 14, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆31Dec 12, 2024Updated last year
- Template-based protein design with Raygun☆151Jul 30, 2026Updated last month
- All-atom generative protein design using SE(3) flow matching☆28Feb 3, 2026Updated 7 months ago
- A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative mod…☆26Aug 5, 2026Updated last month
- LAST: Latent Space Assisted Adaptive Sampling for Protein Trajectories☆13Dec 17, 2022Updated 3 years ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated 2 years ago
- Text-guided protein design☆97Jul 21, 2026Updated last month
- ☆18Feb 19, 2026Updated 6 months ago
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆34Aug 23, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆15Updated this week
- Generative method to design novel proteins using a diffusion model☆43Mar 16, 2023Updated 3 years ago
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 2 years ago
- Display PackedPose objects, Pose objects, or PDB files within a Jupyter notebook and Google Colab☆11Aug 29, 2026Updated last week
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 10 months ago
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆36Nov 10, 2025Updated 9 months ago
- This small repository provides functionality for calculating the charge transfer integrals between two molecules.☆35Apr 18, 2023Updated 3 years ago