Code supporting the Protein Design Archive (PDA) database publication
☆16Feb 5, 2026Updated last month
Alternatives and similar repositories for chronowska-stam-wood-2024-protein-design-archive
Users that are interested in chronowska-stam-wood-2024-protein-design-archive are comparing it to the libraries listed below
Sorting:
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆14Nov 14, 2025Updated 3 months ago
- ☆15Mar 28, 2025Updated 11 months ago
- Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"☆47Aug 5, 2025Updated 7 months ago
- ☆17Mar 26, 2024Updated last year
- ☆20Aug 25, 2025Updated 6 months ago
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆16Feb 13, 2026Updated 3 weeks ago
- A conditionally adapted protein language model for the generation of enzymes☆23Nov 26, 2024Updated last year
- ☆24May 19, 2025Updated 9 months ago
- Foldy: a web-based platform for interactive protein structure analysis☆29Oct 28, 2025Updated 4 months ago
- P450Diffusion: A tool for designing P450 sequences based on diffusion model☆26Jul 16, 2024Updated last year
- ☆11Nov 13, 2024Updated last year
- Fast protein structure searching or your money back☆118Jan 14, 2026Updated last month
- ☆38Updated this week
- bakerlab pymol scripts☆26Feb 6, 2020Updated 6 years ago
- ☆31Dec 12, 2024Updated last year
- ☆65Sep 14, 2023Updated 2 years ago
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆31Aug 23, 2024Updated last year
- Template-based protein design with Raygun☆77Feb 7, 2026Updated last month
- Implementation of MapDiff: "Mask-prior-guided denoising diffusion improves inverse protein folding" in PyTorch☆43Jul 11, 2025Updated 7 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Nov 5, 2025Updated 4 months ago
- [TPAMI 2022] Disentangling Light Fields for Super-Resolution and Disparity Estimation☆13Apr 2, 2024Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆87Jun 23, 2024Updated last year
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆35Nov 10, 2025Updated 4 months ago
- ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models☆39Nov 25, 2024Updated last year
- Surface segregation using Deep Reinforcement Learning☆13Aug 30, 2021Updated 4 years ago
- Performant physics-focussed quantum circuit library built in Rust☆16Sep 4, 2025Updated 6 months ago
- This repository contains the source code for TCBee, a TCP flow analysis tool recording packet headers and kernel metrics at up to 1.4 Mpp…☆13Feb 10, 2026Updated last month
- E(3) equivariant graph neural network for PPI site prediction☆10Sep 18, 2023Updated 2 years ago
- Generative method to design novel proteins using a diffusion model☆43Mar 16, 2023Updated 2 years ago
- MQTTtimer is based mqtt protocol sync timer☆12Feb 6, 2023Updated 3 years ago
- ☆43Jan 10, 2024Updated 2 years ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Jul 29, 2024Updated last year
- Conditioning diffusion models for scaffolding protein motifs. A repository for my master's dissertation.☆12Dec 10, 2024Updated last year
- ☆10Apr 1, 2022Updated 3 years ago
- Moved: https://codeberg.org/koutheir/lm-sensors☆13Mar 27, 2024Updated last year
- Feynman-Kac steering for controllable protein diffusion☆31Jan 14, 2026Updated last month
- ☆10Feb 3, 2026Updated last month
- ☆12Jun 19, 2018Updated 7 years ago
- ☆11Apr 25, 2021Updated 4 years ago