☆106May 11, 2026Updated last week
Alternatives and similar repositories for MassiveFold
Users that are interested in MassiveFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆17May 4, 2026Updated 2 weeks ago
- Efficient manipulation of protein structures in Python☆68Sep 27, 2025Updated 7 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆128Aug 3, 2025Updated 9 months ago
- ☆33Feb 5, 2025Updated last year
- Code for ColabDock paper☆156May 1, 2025Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Multiple Protein Structure Alignment at Scale with FoldMason☆275May 11, 2026Updated last week
- ☆63Apr 9, 2024Updated 2 years ago
- AI-powered macromolecular refinement☆46Apr 26, 2026Updated 3 weeks ago
- Pretrained METL models with minimal dependencies☆17Sep 18, 2025Updated 8 months ago
- Code for the paper "Learning to engineer protein flexibility".☆23Mar 24, 2026Updated last month
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- User friendly and accurate binder design pipeline☆1,096May 11, 2026Updated last week
- Open source code for AlphaFold.☆38May 6, 2026Updated 2 weeks ago
- Diffusion-based all-atom protein generative model.☆236Aug 27, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆1,889May 6, 2026Updated 2 weeks ago
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆334Oct 28, 2024Updated last year
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆526Mar 22, 2026Updated last month
- Making Protein Design accessible to all via Google Colab!☆914Apr 6, 2026Updated last month
- Efficient implementatin of ESM family.☆85Sep 9, 2025Updated 8 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆48Nov 4, 2025Updated 6 months ago
- AlphaFold-initiated replica exchange protein docking☆91Jun 5, 2025Updated 11 months ago
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 6 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A pipeline that used ML model based on Rosetta descriptors to predict the binding affinity of protein-protein complexes☆52Oct 27, 2025Updated 6 months ago
- Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning☆806Updated this week
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆23Oct 31, 2025Updated 6 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Apr 13, 2026Updated last month
- ☆118Jan 3, 2026Updated 4 months ago
- GraphPart, a data partitioning method for ML on biological sequences☆35Oct 26, 2023Updated 2 years ago
- Chai-1, SOTA model for biomolecular structure prediction☆1,936Apr 11, 2026Updated last month
- ☆18Dec 23, 2024Updated last year
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆179Mar 29, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- RoseTTAFold2 protein/nucleic acid complex prediction☆380Jun 3, 2024Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆168Mar 28, 2026Updated last month
- Prediction of Protein-Small molecule binding affinities☆21Oct 1, 2025Updated 7 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆125May 27, 2025Updated 11 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆600Mar 8, 2026Updated 2 months ago
- ☆77Feb 11, 2025Updated last year