☆105May 26, 2026Updated 2 weeks ago
Alternatives and similar repositories for MassiveFold
Users that are interested in MassiveFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆17May 4, 2026Updated last month
- Efficient manipulation of protein structures in Python☆68Sep 27, 2025Updated 8 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆131Aug 3, 2025Updated 10 months ago
- ☆32Feb 5, 2025Updated last year
- Code for ColabDock paper☆156May 1, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Multiple Protein Structure Alignment at Scale with FoldMason☆278May 11, 2026Updated 3 weeks ago
- ☆63Apr 9, 2024Updated 2 years ago
- AI-powered macromolecular refinement☆47Apr 26, 2026Updated last month
- Pretrained METL models with minimal dependencies☆16Sep 18, 2025Updated 8 months ago
- Code for the paper "Learning to engineer protein flexibility".☆22Mar 24, 2026Updated 2 months ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- User friendly and accurate binder design pipeline☆1,116May 11, 2026Updated 3 weeks ago
- Open source code for AlphaFold.☆39May 6, 2026Updated last month
- Diffusion-based all-atom protein generative model.☆236Aug 27, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Toward High-Accuracy Open-Source Biomolecular Structure Prediction.☆1,934May 6, 2026Updated last month
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆333Oct 28, 2024Updated last year
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆528Mar 22, 2026Updated 2 months ago
- Making Protein Design accessible to all via Google Colab!☆913Apr 6, 2026Updated 2 months ago
- Efficient implementatin of ESM family.☆85Sep 9, 2025Updated 9 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆49Nov 4, 2025Updated 7 months ago
- AlphaFold-initiated replica exchange protein docking☆92Jun 5, 2025Updated last year
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆139Nov 11, 2025Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A pipeline that used ML model based on Rosetta descriptors to predict the binding affinity of protein-protein complexes☆52Oct 27, 2025Updated 7 months ago
- Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning☆824May 28, 2026Updated last week
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆23Oct 31, 2025Updated 7 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Apr 13, 2026Updated last month
- ☆119Jan 3, 2026Updated 5 months ago
- GraphPart, a data partitioning method for ML on biological sequences☆35Oct 26, 2023Updated 2 years ago
- Chai-1, SOTA model for biomolecular structure prediction☆1,946Apr 11, 2026Updated last month
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆180Updated this week
- ☆18Dec 23, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- RoseTTAFold2 protein/nucleic acid complex prediction☆380Jun 3, 2024Updated 2 years ago
- Prediction of Protein-Small molecule binding affinities☆21Oct 1, 2025Updated 8 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆127May 27, 2025Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆168Mar 28, 2026Updated 2 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 2 years ago
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆604Mar 8, 2026Updated 3 months ago
- ☆78Feb 11, 2025Updated last year