Alternatives and similar repositories for AlphaFold-IDP

Users that are interested in AlphaFold-IDP are comparing it to the libraries listed below

• KosinskiLab / alphafold3x
  Explicit crosslinks in AlphaFold 3
  ☆22Updated 4 months ago
• liedllab / surface_analyses
  Scores for Hydrophobicity and Charges based on SASAs
  ☆34Updated last month
• ajasja / prosculpt
  Protein design and sculpting using Rosetta and Deep learning methods (RFDiff and Alphafold2)
  ☆35Updated 2 weeks ago
• iamysk / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆51Updated 2 weeks ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆19Updated last month
• ld139 / ApoDock_public
  Code for ApoDock
  ☆20Updated 4 months ago
• tiwarylab / af2rave
  Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2
  ☆51Updated 3 weeks ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆41Updated last week
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆30Updated last year
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆29Updated 2 months ago
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆24Updated 5 years ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆51Updated 2 months ago
• Nucleus2014 / protease-gcnn-pytorch
  ☆20Updated last year
• KULL-Centre / _2024_cagiada_stability
  ☆70Updated 4 months ago
• alepandini / DyNoPy
  DyNoPy
  ☆11Updated 11 months ago
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated last year
• haddocking / arctic3d
  Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information
  ☆30Updated last week
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆22Updated last year
• luwei0917 / AlphaFold3_PPI
  ☆15Updated last year
• Gonglab-THU / GDFold2
  ☆15Updated 7 months ago
• Jnelen / DiffDockHPC
  DiffDock implementation that adds support for HPC execution using Slurm and Singularity
  ☆26Updated 2 months ago
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated 5 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated last month
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆32Updated 7 months ago
• johnnytam100 / AlphaCutter
  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
  ☆15Updated 2 years ago
• ComputArtCMCG / ProBID-NET
  ☆14Updated 2 months ago
• sokrypton / af2bind
  ☆50Updated 3 weeks ago
• patrickbryant1 / MoLPC
  Modelling of Large Protein Complexes
  ☆37Updated last week
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆30Updated last year
• polizzilab / NISE
  Neural Iterative Selection-Expansion using LASErMPNN and Boltz-2x
  ☆18Updated last week