Code for deep learning guided design of dynamic proteins
☆33Jul 16, 2024Updated last year
Alternatives and similar repositories for dynamic_protein_design
Users that are interested in dynamic_protein_design are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Mar 28, 2025Updated last year
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆34Aug 23, 2024Updated last year
- No description yet.☆17Aug 8, 2024Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆63May 21, 2025Updated 11 months ago
- Design a local part of a protein☆20Jan 12, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆27Aug 8, 2025Updated 9 months ago
- Geometric Algebra Flow Matching (GAFL) for Protein Backbone Generation☆19Oct 31, 2025Updated 6 months ago
- A conditionally adapted protein language model for the generation of enzymes☆23Nov 26, 2024Updated last year
- [Nature Machine Intelligence] ImmunoStruct enables multimodal deep learning for immunogenicity prediction☆44Mar 5, 2026Updated 2 months ago
- Efficient manipulation of protein structures in Python☆67Sep 27, 2025Updated 7 months ago
- Lightweight induced fit docking☆22May 22, 2023Updated 2 years ago
- ☆21Oct 26, 2024Updated last year
- Minimal AlphaFold☆56Aug 24, 2024Updated last year
- Extract ligand binding sites from PDB. Match the binding sites to de novo scaffolds.☆12Dec 29, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A protein structure dataset that combines 3D atomic coordinates with biophysical and evolutionary properties for every atom in every "cle…☆38Jul 25, 2024Updated last year
- Automated Adaptive Absolute alchemical Free Energy calculator☆116May 1, 2026Updated last week
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆93Jun 11, 2025Updated 10 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆126Oct 24, 2025Updated 6 months ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆52Mar 25, 2026Updated last month
- Generative diverse protein backbones by protein language model☆34Feb 27, 2026Updated 2 months ago
- ☆11Mar 28, 2024Updated 2 years ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 6 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆10Oct 28, 2022Updated 3 years ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆89Jun 23, 2024Updated last year
- ☆21Updated this week
- Molecular Dynamics for Experimentalists☆68Apr 17, 2026Updated 3 weeks ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆191Jun 24, 2024Updated last year
- It's a package for evaluation of predicted poses, right?☆76Mar 27, 2026Updated last month
- AlphaFold-initiated replica exchange protein docking☆91Jun 5, 2025Updated 11 months ago
- ☆97Oct 14, 2025Updated 6 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Explicit crosslinks in AlphaFold 3☆23Mar 17, 2025Updated last year
- ☆41Jan 21, 2026Updated 3 months ago
- SubPEx (Sub-Pocket Explorer) is a tool to enhance ensemble (multiple-receptor/relaxed-complex) virtual screening. It uses weighted ensemb…☆18Jun 30, 2025Updated 10 months ago
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- scripts to find PBD structures for cancer driver proteins☆31Feb 27, 2026Updated 2 months ago
- Metrics for our protein design competitions.☆35Nov 1, 2024Updated last year
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆17Updated this week