amyguo1997 / dynamic_protein_design

Related projects ⓘ

Alternatives and complementary repositories for dynamic_protein_design

• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated 8 months ago
• meneshail / TopoDiff
  Code release for "Improving diffusion-based protein backbone generation with global-geometry-aware latent encoding"
  ☆11Updated 2 weeks ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆33Updated 2 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆25Updated this week
• sokrypton / roscon2024
  Tutorial files
  ☆11Updated 3 months ago
• johnnytam100 / AlphaCutter
  This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.
  ☆14Updated last year
• alepandini / DyNoPy
  DyNoPy
  ☆11Updated 2 months ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆24Updated last month
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆25Updated last year
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆23Updated 3 months ago
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆24Updated 7 months ago
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆29Updated 8 months ago
• bwicky / oligomer_hallucination
  ☆35Updated 11 months ago
• maltesie / bridge2
  GUI for interactive graph-based analyses of hydrogen bond networks in crystal structures and MD trajectories.
  ☆9Updated last year
• bene837 / af2seq
  ☆38Updated 2 months ago
• DeepGraphLearning / esm-s
  Structure-Informed Protein Language Model
  ☆26Updated 9 months ago
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆24Updated this week
• kamerlinlab / KIN
  Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…
  ☆12Updated last year
• PKUliujl / GeoSeqBuilder
  ☆20Updated last month
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆20Updated 11 months ago
• Jnelen / DiffDockHPC
  DiffDock implementation that adds support for HPC execution using Slurm and Singularity
  ☆24Updated last month
• programmablebio / saltnpeppr
  An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders
  ☆16Updated 2 months ago
• SimonKitSangChu / EsmTherm
  ☆10Updated 6 months ago
• jsunn-y / CARE
  CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes
  ☆24Updated 3 weeks ago
• issararab / PEvoLM
  Protein Sequence Evolutionary Information Language Model
  ☆12Updated last year
• Graylab / CAPSIF
  CArbohydrate-Protein Site IdentiFier
  ☆10Updated last year
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆9Updated 4 years ago
• swanss / FragFold
  ☆17Updated last week
• KULL-Centre / _2024_cagiada_stability
  ☆45Updated 3 weeks ago