A flow matching model for generating conformational ensembles of protein backbones.
☆49May 22, 2026Updated 2 months ago
Alternatives and similar repositories for bbflow
Users that are interested in bbflow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Flexibility-conditioned protein structure design☆36Mar 10, 2026Updated 5 months ago
- Fast protein backbone flexibility prediction model☆36Jan 4, 2026Updated 7 months ago
- Geometric Algebra Flow Matching (GAFL) for Protein Backbone Generation☆20May 5, 2026Updated 3 months ago
- Feynman-Kac steering for controllable protein diffusion☆37Aug 6, 2026Updated last week
- A machine learned Molecular Mechanics force field with integration into GROMACS and OpenMM☆64Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Bayesian Optimization for protein design and mining☆27Jul 2, 2026Updated last month
- Reactive MD pipeline for GROMACS using Kinetic Monte Carlo / Molecular Dynamics (KIMMDY)☆26Apr 27, 2026Updated 3 months ago
- ☆15Jun 19, 2026Updated last month
- ☆47Updated this week
- A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…☆43Aug 6, 2026Updated last week
- Bridging Smoothed Molecular Dynamics and Score-Based Learning for Conformational Ensembles☆20May 16, 2026Updated 2 months ago
- ☆25Jun 10, 2026Updated 2 months ago
- Public version for Distance-AF☆32Aug 17, 2025Updated 11 months ago
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆13Jul 4, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ⛓️ Boltz with restraint-guided inference☆21Aug 6, 2026Updated last week
- Latents-based conformational control in OpenFold3.☆75May 25, 2026Updated 2 months ago
- protein structure generation with sparse all-atom denoising models☆62Jul 7, 2026Updated last month
- Biasing Conformational Sampling in AlphaFold 3 and Boltz-2 via Pair Representation Scaling☆29Jul 6, 2026Updated last month
- Antibody structure prediction model for sampling conformational ensembles☆19Apr 14, 2026Updated 4 months ago
- ☆55Apr 22, 2026Updated 3 months ago
- ☆27May 16, 2026Updated 2 months ago
- DynamicGT: a dynamic-aware geometric transformer model to predict protein binding interfaces in flexible and disordered regions☆16Jun 18, 2026Updated last month
- Antibody structure prediction☆39Dec 16, 2025Updated 7 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Histidine Protonation State Optimizer for setting up MD simulations based on semi-empirical QM resonance☆20Mar 6, 2026Updated 5 months ago
- A comprehensive repository of scripts, software, and tutorials for molecular evolution, computational protein design, and structural bioi…☆33Jul 26, 2026Updated 2 weeks ago
- Potts model-based protein sequence design☆110Jul 1, 2026Updated last month
- Humanness of de-novo designed proteins☆47May 19, 2025Updated last year
- Metadiffusion implemented in Boltz-2☆24Feb 23, 2026Updated 5 months ago
- Deep generative modeling of protein structural ensembles☆41May 27, 2026Updated 2 months ago
- composite-objective protein design☆356Updated this week
- asyncmd is a library to write concurrent code to run and analyze molecular dynamics simulations using pythons async/await syntax. Computa…☆20Jul 16, 2026Updated 3 weeks ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- mdml: Deep Learning for Molecular Simulations☆55May 17, 2025Updated last year
- ☆76May 18, 2026Updated 2 months ago
- Code for "Calibrating Generative Models" by Henry Smith, Nathaniel Diamant, and Brian Trippe☆49Aug 8, 2026Updated last week
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆539Mar 22, 2026Updated 4 months ago
- A framework for training energy-based diffusion models for sampling and energy estimation.☆108May 10, 2026Updated 3 months ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆54Jun 22, 2026Updated last month
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆15Aug 1, 2026Updated 2 weeks ago