mtGrasp: de novo reference-grade mitochondrial genome assembly and standardization
☆24Jun 29, 2026Updated last month
Alternatives and similar repositories for mtGrasp
Users that are interested in mtGrasp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 🧬 Unique (& conserved) DNA sequence identification☆20Jun 4, 2026Updated 2 months ago
- BOSTIn is a new, user-friendly phylogenetic artifact identification package.☆12Jul 11, 2026Updated 3 weeks ago
- MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data☆116Sep 2, 2025Updated 11 months ago
- Improved long-read assembly by preserving contained reads☆30Aug 22, 2024Updated last year
- Mitochondrial Genome Assembly☆17Feb 21, 2024Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- a flexible tool for microsatellite investigation and visualization☆10Jun 15, 2026Updated last month
- An ultrafast and memory efficient tool for phylogenomics☆26Apr 17, 2026Updated 3 months ago
- HyPo: Super Fast & Accurate Polisher for Long Read Genome Assemblies☆67Feb 23, 2020Updated 6 years ago
- Trim, Align to genome, Deduplicate, Realign WGS sequencing samples☆17Feb 23, 2026Updated 5 months ago
- Linear-time de novo Long Read Assembler☆42Mar 19, 2026Updated 4 months ago
- 📚Bioinformatics Technology Lab common code library☆29Apr 30, 2026Updated 3 months ago
- ☆14Jul 14, 2026Updated 3 weeks ago
- k-mer-based non-Bayesian Taxonomic Classifier☆20May 28, 2026Updated 2 months ago
- interactive visualization of single-cell transcriptomes☆11Mar 10, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Detecting NUMTs from WGS☆13Nov 19, 2023Updated 2 years ago
- Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.☆26Oct 24, 2025Updated 9 months ago
- ☆16Apr 11, 2026Updated 3 months ago
- ✏️ Genome assembly polishing & SNV detection☆74Jun 12, 2026Updated last month
- cobraa (coalescent based reconstruction of ancient admixture): a hidden Markov model to infer ghost admixture using just a diploid sequen…☆24Jun 17, 2025Updated last year
- A software for gap filling in genome assemblies☆10Aug 12, 2022Updated 3 years ago
- SYNPHONI is a tool designed for reconstructing the dynamic evolution of syntenic relationships across all scales of phylogenetic distance…☆12May 7, 2023Updated 3 years ago
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆37Jul 24, 2026Updated 2 weeks ago
- a toolbox for utilize organelle genomic data☆25May 18, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Dividing heterogeneous long-read sequencing into groups with de Bruijn graphs☆46Updated this week
- Software for hybridization capture bait design☆11Jun 12, 2026Updated last month
- an ensemble usage of MAFFT-linsi --add on large datasets☆13May 31, 2024Updated 2 years ago
- ⛓ Correct misassemblies using linked AND long reads☆64Mar 24, 2026Updated 4 months ago
- Tools for F1 hybrid PSMC (hPSMC) divergence time inference from whole genomes☆15May 29, 2024Updated 2 years ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆51Mar 4, 2024Updated 2 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆32Jul 13, 2026Updated 3 weeks ago
- a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference☆92Updated this week
- A program for divvying or partially filtering multiple sequence alignments☆29Oct 14, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Automated and parallel pipeline for the Curation of UltraconseRved Elements☆10Jan 16, 2025Updated last year
- A repository for my work on rCRUX☆14Jun 21, 2024Updated 2 years ago
- A library for working with phylogenetic and population genetic data.☆67Jul 18, 2026Updated 3 weeks ago
- An R function to compute Concordance Factors from SNP datasets☆16Dec 4, 2025Updated 8 months ago
- Manipulate and generate figures for trees in Newick format☆22Jul 31, 2025Updated last year
- ☆22Mar 25, 2014Updated 12 years ago
- MIRA sequence assembler☆35Jan 2, 2025Updated last year